Information for 19-CCTGTCCCAGCCA (Motif 26)

A G T C G T A C A C G T A C T G A C G T G A T C A G T C A G T C C G T A A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A C G T A C T G A C T G C A T G C G T A A G T C G T C A A C T G A C T G
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.0 +/- 12.6bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCTGTCCCAGCCA
-CTGTTCCTGG--
 A G T C G T A C A C G T A C T G A C G T G A T C A G T C A G T C C G T A A C T G A G T C A G T C C G T A
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CCTGTCCCAGCCA------
----TCCCAGMCRAGCCCC
 A G T C G T A C A C G T A C T G A C G T G A T C A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CCTGTCCCAGCCA-
------BCAGACWA
 A G T C G T A C A C G T A C T G A C G T G A T C A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCTGTCCCAGCCA-----
-CAAATCCAGACATCACA
 A G T C G T A C A C G T A C T G A C G T G A T C A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCTGTCCCAGCCA-
----TTCCCGCCWG
 A G T C G T A C A C G T A C T G A C G T G A T C A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCTGTCCCAGCCA
---ATGCCAACC-
 A G T C G T A C A C G T A C T G A C G T G A T C A G T C A G T C C G T A A C T G A G T C A G T C C G T A
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCTGTCCCAGCCA---
ACTATGCCAACCTACC
 A G T C G T A C A C G T A C T G A C G T G A T C A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CCTGTCCCAGCCA-
------CCAGACAG
 A G T C G T A C A C G T A C T G A C G T G A T C A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCTGTCCCAGCCA---
NAAACCGGTTNNAACCGGTT
 A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C T G A C G T G A T C A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T
T G A C T C G A C T G A C T G A A T G C G A T C C T A G T A C G G A C T G A C T G A T C T C G A C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CCTGTCCCAGCCA
-------CAGCC-
 A G T C G T A C A C G T A C T G A C G T G A T C A G T C A G T C C G T A A C T G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T