Information for 18-CCAAGTTCTCTGG (Motif 25)

A G T C A G T C G T C A C G T A A C T G A C G T A C G T A G T C A C G T A G T C A C G T C T A G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C T G C G T A A C T G G T C A G T C A A G T C A C G T A C G T A C T G C T A G
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 30.5bp
Average Position of motif in Background56.8 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat6/MA0520.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCAAGTTCTCTGG-----
---ANTTCTCAGGAANNN
 A G T C A G T C G T C A C G T A A C T G A C G T A C G T A G T C A C G T A G T C A C G T C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCAAGTTCTCTGG-
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A G T C A G T C G T C A C G T A A C T G A C G T A C G T A G T C A C G T A G T C A C G T C T A G A C T G A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:3
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCAAGTTCTCTGG--
-----TTCTNMGGAA
 A G T C A G T C G T C A C G T A A C T G A C G T A C G T A G T C A C G T A G T C A C G T C T A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

MAX::MYC/MA0059.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCAAGTTCTCTGG
ACCACGTGCTC---
 A C G T A G T C A G T C G T C A C G T A A C T G A C G T A C G T A G T C A C G T A G T C A C G T C T A G A C T G
C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCAAGTTCTCTGG
NTCAAGGTCA----
 A C G T A G T C A G T C G T C A C G T A A C T G A C G T A C G T A G T C A C G T A G T C A C G T C T A G A C T G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CCAAGTTCTCTGG---
------GGTCTGGCAT
 A G T C A G T C G T C A C G T A A C T G A C G T A C G T A G T C A C G T A G T C A C G T C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CCAAGTTCTCTGG
BTCAAGGTCA----
 A C G T A G T C A G T C G T C A C G T A A C T G A C G T A C G T A G T C A C G T A G T C A C G T C T A G A C T G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CCAAGTTCTCTGG---
-AGNGTTCTAATGANN
 A G T C A G T C G T C A C G T A A C T G A C G T A C G T A G T C A C G T A G T C A C G T C T A G A C T G A C G T A C G T A C G T
A C G T G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCAAGTTCTCTGG--
---ANTTCTNNAGAA
 A G T C A G T C G T C A C G T A A C T G A C G T A C G T A G T C A C G T A G T C A C G T C T A G A C T G A C G T A C G T
A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A

Myc/MA0147.2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCAAGTTCTCTGG
CCATGTGCTT---
 A G T C A G T C G T C A C G T A A C T G A C G T A C G T A G T C A C G T A G T C A C G T C T A G A C T G
T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T A C G T A C G T