Information for 9-AACCAGTTWG (Motif 12)

C G T A C G T A A G T C G T A C C G T A A T C G A C G T A G C T C G T A C T A G
Reverse Opposite:
G A T C C G A T C T G A C G T A A T G C A C G T A C T G A C T G A C G T A C G T
p-value:1e-12
log p-value:-2.836e+01
Information Content per bp:1.836
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.54%
Number of Background Sequences with motif135.8
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets42.8 +/- 27.8bp
Average Position of motif in Background48.7 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL1/MA0647.1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--AACCAGTTWG
AAAACCGGTTTT
 A C G T A C G T C G T A C G T A A G T C G T A C C G T A A T C G A C G T A G C T C G T A C T A G
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

TFCP2/MA0145.3/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AACCAGTTWG
AAACCGGTTT-
 A C G T C G T A C G T A A G T C G T A C C G T A A T C G A C G T A G C T C G T A C T A G
T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AACCAGTTWG---
AACAACCAATTAATTC
 A C G T A C G T A C G T C G T A C G T A A G T C G T A C C G T A A T C G A C G T A G C T C G T A C T A G A C G T A C G T A C G T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

PH0040.1_Hmbox1/Jaspar

Match Rank:4
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------AACCAGTTWG-
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C G T A C C G T A A T C G A C G T A G C T C G T A C T A G A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PH0004.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AACCAGTTWG----
CATAACCACTTAACAAC
 A C G T A C G T A C G T C G T A C G T A A G T C G T A C C G T A A T C G A C G T A G C T C G T A C T A G A C G T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AACCAGTTWG
MRSCACTYAA
 C G T A C G T A A G T C G T A C C G T A A T C G A C G T A G C T C G T A C T A G
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

PH0006.1_Barhl2/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AACCAGTTWG---
AAAAACCAATTAAGAA
 A C G T A C G T A C G T C G T A C G T A A G T C G T A C C G T A A T C G A C G T A G C T C G T A C T A G A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

Nkx3-1/MA0124.2/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AACCAGTTWG
-ACCACTTAA
 C G T A C G T A A G T C G T A C C G T A A T C G A C G T A G C T C G T A C T A G
A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AACCAGTTWG----
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T C G T A C G T A A G T C G T A C C G T A A T C G A C G T A G C T C G T A C T A G A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

PH0108.1_Msx3/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AACCAGTTWG---
CAAAACCAATTAATTT
 A C G T A C G T A C G T C G T A C G T A A G T C G T A C C G T A A T C G A C G T A G C T C G T A C T A G A C G T A C G T A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T