Information for 13-GCTCTGCGCCAGG (Motif 14)

A C T G A G T C A C G T A G T C A G C T A C T G A G T C A C T G A G T C A G T C C G T A A C T G A T C G
Reverse Opposite:
A T G C A G T C A C G T A C T G A C T G G T A C C T A G A G T C C T G A A C T G C G T A A C T G A G T C
p-value:1e-9
log p-value:-2.161e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.4 +/- 22.8bp
Average Position of motif in Background65.6 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCTCTGCGCCAGG
TTGGCANNNTGCCAAG
 A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G C T A C T G A G T C A C T G A G T C A G T C C G T A A C T G A T C G
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCTCTGCGCCAGG---
AGCTCGGCGCCAAAAGC
 A C G T A C T G A G T C A C G T A G T C A G C T A C T G A G T C A C T G A G T C A G T C C G T A A C T G A T C G A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCTCTGCGCCAGG---
YCAGGCWCAGTACCAGGCTC
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G C T A C T G A G T C A C T G A G T C A G T C C G T A A C T G A T C G A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCTCTGCGCCAGG---
CCTTCGGCGCCAAAAGG
 A C G T A C T G A G T C A C G T A G T C A G C T A C T G A G T C A C T G A G T C A G T C C G T A A C T G A T C G A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCTCTGCGCCAGG
NNGCNCTGCGCGGC-
 A C G T A C G T A C T G A G T C A C G T A G T C A G C T A C T G A G T C A C T G A G T C A G T C C G T A A C T G A T C G
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCTCTGCGCCAGG
---CTGTTCCTGG
 A C T G A G T C A C G T A G T C A G C T A C T G A G T C A C T G A G T C A G T C C G T A A C T G A T C G
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTCTGCGCCAGG
GCTCCG-------
 A C T G A G T C A C G T A G T C A G C T A C T G A G T C A C T G A G T C A G T C C G T A A C T G A T C G
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCTCTGCGCCAGG
TTGGCATGGTGCCA--
 A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G C T A C T G A G T C A C T G A G T C A G T C C G T A A C T G A T C G
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCTCTGCGCCAGG
TGGCAGNCTGCCAG-
 A C G T A C G T A C T G A G T C A C G T A G T C A G C T A C T G A G T C A C T G A G T C A G T C C G T A A C T G A T C G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GCTCTGCGCCAGG
----CGTGCCAAG
 A C T G A G T C A C G T A G T C A G C T A C T G A G T C A C T G A G T C A G T C C G T A A C T G A T C G
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G