Information for 9-AGSTGTCARKTYCARK (Motif 13)

C T G A A T C G A T G C A C G T A C T G A C G T A G T C C G T A C T A G A C G T A G C T A G T C A G T C C G T A C T A G A C G T
Reverse Opposite:
T G C A A G T C A C G T A C T G C T A G C T G A G T C A A G T C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G C T
p-value:1e-10
log p-value:-2.435e+01
Information Content per bp:1.844
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.7 +/- 26.8bp
Average Position of motif in Background59.1 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0169.1_Tgif1/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----AGSTGTCARKTYCARK
NNNCAGCTGTCAATATN---
 A C G T A C G T A C G T A C G T C T G A A T C G A T G C A C G T A C T G A C G T A G T C C G T A C T A G A C G T A G C T A G T C A G T C C G T A C T A G A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGSTGTCARKTYCARK
AGGTGTCA--------
 C T G A A T C G A T G C A C G T A C T G A C G T A G T C C G T A C T A G A C G T A G C T A G T C A G T C C G T A C T A G A C G T
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AGSTGTCARKTYCARK
AACTAGCTGTCAATAC----
 A C G T A C G T A C G T A C G T C T G A A T C G A T G C A C G T A C T G A C G T A G T C C G T A C T A G A C G T A G C T A G T C A G T C C G T A C T A G A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C A C G T A C G T A C G T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AGSTGTCARKTYCARK
AACGAGCTGTCAATAC----
 A C G T A C G T A C G T A C G T C T G A A T C G A T G C A C G T A C T G A C G T A G T C C G T A C T A G A C G T A G C T A G T C A G T C C G T A C T A G A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C A C G T A C G T A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AGSTGTCARKTYCARK
AAAGACCTGTCAATAC----
 A C G T A C G T A C G T A C G T C T G A A T C G A T G C A C G T A C T G A C G T A G T C C G T A C T A G A C G T A G C T A G T C A G T C C G T A C T A G A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C A C G T A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AGSTGTCARKTYCARK
AATTACCTGTCAATAC----
 A C G T A C G T A C G T A C G T C T G A A T C G A T G C A C G T A C T G A C G T A G T C C G T A C T A G A C G T A G C T A G T C A G T C C G T A C T A G A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGSTGTCARKTYCARK
-GCTGTCAA-------
 C T G A A T C G A T G C A C G T A C T G A C G T A G T C C G T A C T A G A C G T A G C T A G T C A G T C C G T A C T A G A C G T
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AGSTGTCARKTYCARK
AAGCACCTGTCAATAT----
 A C G T A C G T A C G T A C G T C T G A A T C G A T G C A C G T A C T G A C G T A G T C C G T A C T A G A C G T A G C T A G T C A G T C C G T A C T A G A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGSTGTCARKTYCARK
VGCTGWCAVB------
 C T G A A T C G A T G C A C G T A C T G A C G T A G T C C G T A C T A G A C G T A G C T A G T C A G T C C G T A C T A G A C G T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AGSTGTCARKTYCARK
AAAGACCTGTCAATCC----
 A C G T A C G T A C G T A C G T C T G A A T C G A T G C A C G T A C T G A C G T A G T C C G T A C T A G A C G T A G C T A G T C A G T C C G T A C T A G A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C A C G T A C G T A C G T A C G T