Information for 23-ACATGGATCA (Motif 56)

C G T A A G T C C G T A A C G T A C T G A C T G C G T A A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G A C G T
p-value:1e-4
log p-value:-1.024e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.7 +/- 4.9bp
Average Position of motif in Background49.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:ACATGGATCA-
---NGGATTAN
 C G T A A G T C C G T A A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C G T
A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

CUX1/MA0754.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACATGGATCA
NTATCGATTA
 C G T A A G T C C G T A A C G T A C T G A C T G C G T A A C G T A G T C C G T A
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ACATGGATCA--
-AATGTATCAAT
 C G T A A G T C C G T A A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C G T A C G T
A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACATGGATCA
TCATCAATCA
 C G T A A G T C C G T A A C G T A C T G A C T G C G T A A C G T A G T C C G T A
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ACATGGATCA-
GYCATCMATCAT
 A C G T C G T A A G T C C G T A A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C G T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACATGGATCA
NTATYGATCH
 C G T A A G T C C G T A A C G T A C T G A C T G C G T A A C G T A G T C C G T A
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

CUX2/MA0755.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACATGGATCA
TTATCGATTA
 C G T A A G T C C G T A A C G T A C T G A C T G C G T A A C G T A G T C C G T A
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A

PH0082.1_Irx2/Jaspar

Match Rank:8
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------ACATGGATCA-
ANTNTTACATGTATNTA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

Myc/MA0147.2/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ACATGGATCA
AAGCACATGG----
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C T G C G T A A C G T A G T C C G T A
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ACATGGATCA--
AATATACATGTAAAATT
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T