Information for 25-AAGATARNTATCT (Motif 54)

T G C A C G T A A T C G G T C A C A G T G T C A C T A G A G T C C G A T G C T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G G T C A C G A T C G T A A C T G A G T C A C G T G T C A A C G T A T G C A C G T A C G T
p-value:1e-6
log p-value:-1.396e+01
Information Content per bp:1.707
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif83.1
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets58.8 +/- 31.2bp
Average Position of motif in Background44.5 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-AAGATARNTATCT-
NNAGATNVNWATCTN
 A C G T T G C A C G T A A T C G G T C A C A G T G T C A C T A G A G T C C G A T G C T A A C G T A G T C A C G T A C G T
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAGATARNTATCT-----
-NNNCTGATATCTCNNNN
 T G C A C G T A A T C G G T C A C A G T G T C A C T A G A G T C C G A T G C T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

GATA2/MA0036.2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAGATARNTATCT
NCAGATAAGAANNN
 A C G T T G C A C G T A A T C G G T C A C A G T G T C A C T A G A G T C C G A T G C T A A C G T A G T C A C G T
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

PH0074.1_Hoxd1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGATARNTATCT---
TAAACTAATTAGCTGTA
 A C G T T G C A C G T A A T C G G T C A C A G T G T C A C T A G A G T C C G A T G C T A A C G T A G T C A C G T A C G T A C G T A C G T
C G A T T C G A G C T A T C A G A G T C G A C T T G C A C G T A C G A T A C G T C T G A T C A G A G T C A C G T A C T G C A G T G C T A

PH0053.1_Hoxa6/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAGATARNTATCT---
AAGGTAATTACCTAAT
 T G C A C G T A A T C G G T C A C A G T G T C A C T A G A G T C C G A T G C T A A C G T A G T C A C G T A C G T A C G T A C G T
T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

PH0049.1_Hoxa2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAGATARNTATCT---
AAGGTAATTAGCTCAT
 T G C A C G T A A T C G G T C A C A G T G T C A C T A G A G T C C G A T G C T A A C G T A G T C A C G T A C G T A C G T A C G T
C T G A T G C A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A T A C G G A T C G A C T G T A C C G T A C G A T

PH0045.1_Hoxa1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAGATARNTATCT---
ACGGTAATTAGCTCAG
 T G C A C G T A A T C G G T C A C A G T G T C A C T A G A G T C C G A T G C T A A C G T A G T C A C G T A C G T A C G T A C G T
T C G A T G A C C T A G A C T G A G C T G T C A C G T A A C G T A C G T C T G A T A C G A G T C G A C T G A T C C T G A C T A G

PH0052.1_Hoxa5/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAGATARNTATCT---
ACGGTAATTAGCTCAG
 T G C A C G T A A T C G G T C A C A G T G T C A C T A G A G T C C G A T G C T A A C G T A G T C A C G T A C G T A C G T A C G T
T C G A T G A C C T A G A C T G G A C T G T C A G T C A A C G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A C T A G

Hoxb5/MA0904.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAGATARNTATCT---
ACGGTAATTAGCTCAT
 T G C A C G T A A T C G G T C A C A G T G T C A C T A G A G T C C G A T G C T A A C G T A G T C A C G T A C G T A C G T A C G T
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T

PH0060.1_Hoxb5/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAGATARNTATCT---
ACGGTAATTAGCTCAT
 T G C A C G T A A T C G G T C A C A G T G T C A C T A G A G T C C G A T G C T A A C G T A G T C A C G T A C G T A C G T A C G T
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T