Information for 3-AGGATGVAACTGH (Motif 4)

C G T A C T A G C T A G T C G A C G A T C T A G T A G C T C G A T C G A T A G C C A G T A C T G G A C T
Reverse Opposite:
C T G A A G T C G T C A A T C G A G C T A C G T A T C G A G T C C G T A A C G T A G T C A G T C G A C T
p-value:1e-13
log p-value:-3.166e+01
Information Content per bp:1.708
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif124.7
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets50.5 +/- 28.4bp
Average Position of motif in Background58.4 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGGATGVAACTGH
AGGAAACAGCTG-
 C G T A C T A G C T A G T C G A C G A T C T A G T A G C T C G A T C G A T A G C C A G T A C T G G A C T
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGGATGVAACTGH
ATGATGCAAT---
 C G T A C T A G C T A G T C G A C G A T C T A G T A G C T C G A T C G A T A G C C A G T A C T G G A C T
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGGATGVAACTGH
MTGATGCAAT---
 C G T A C T A G C T A G T C G A C G A T C T A G T A G C T C G A T C G A T A G C C A G T A C T G G A C T
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGGATGVAACTGH-
--WATGCAAATGAG
 C G T A C T A G C T A G T C G A C G A T C T A G T A G C T C G A T C G A T A G C C A G T A C T G G A C T A C G T
A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

PB0181.1_Spdef_2/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AGGATGVAACTGH
CTACTAGGATGTNNTN--
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G C T A G T C G A C G A T C T A G T A G C T C G A T C G A T A G C C A G T A C T G G A C T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGGATGVAACTGH-
-ATATGCAAATNNN
 C G T A C T A G C T A G T C G A C G A T C T A G T A G C T C G A T C G A T A G C C A G T A C T G G A C T A C G T
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGGATGVAACTGH
NATGTTGCAA----
 A C G T C G T A C T A G C T A G T C G A C G A T C T A G T A G C T C G A T C G A T A G C C A G T A C T G G A C T
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGGATGVAACTGH-
--TATGCWAATBAV
 C G T A C T A G C T A G T C G A C G A T C T A G T A G C T C G A T C G A T A G C C A G T A C T G G A C T A C G T
A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Pou2f3/MA0627.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGGATGVAACTGH--
TTGTATGCAAATTAGA
 A C G T C G T A C T A G C T A G T C G A C G A T C T A G T A G C T C G A T C G A T A G C C A G T A C T G G A C T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGGATGVAACTGH--
TTGTATGCAAATTAGA
 A C G T C G T A C T A G C T A G T C G A C G A T C T A G T A G C T C G A T C G A T A G C C A G T A C T G G A C T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A