Information for 14-YAARCMTKCAGAA (Motif 35)

A G T C G T C A C G T A C T A G A G T C G T A C A C G T A C T G G T A C C G T A A T C G C G T A G C T A
Reverse Opposite:
C A G T A C G T A T G C A C G T C A T G T G A C C G T A A C T G A C T G A G T C C G A T A C G T C T A G
p-value:1e-8
log p-value:-2.061e+01
Information Content per bp:1.747
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif29.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets45.0 +/- 17.7bp
Average Position of motif in Background55.7 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:forward strand
Alignment:YAARCMTKCAGAA----
AAAATATGCATAATAAA
 A G T C G T C A C G T A C T A G A G T C G T A C A C G T A C T G G T A C C G T A A T C G C G T A G C T A A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:YAARCMTKCAGAA
CAAGCTT------
 A G T C G T C A C G T A C T A G A G T C G T A C A C G T A C T G G T A C C G T A A T C G C G T A G C T A
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--YAARCMTKCAGAA--
AATATACATGTAAAATT
 A C G T A C G T A G T C G T C A C G T A C T A G A G T C G T A C A C G T A C T G G T A C C G T A A T C G C G T A G C T A A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---YAARCMTKCAGAA
GGTTAAACATTAA---
 A C G T A C G T A C G T A G T C G T C A C G T A C T A G A G T C G T A C A C G T A C T G G T A C C G T A A T C G C G T A G C T A
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:YAARCMTKCAGAA-
CAAACGTAAACAAT
 A G T C G T C A C G T A C T A G A G T C G T A C A C G T A C T G G T A C C G T A A T C G C G T A G C T A A C G T
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

PH0085.1_Irx4/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--YAARCMTKCAGAA--
AATATACATGTAAAACA
 A C G T A C G T A G T C G T C A C G T A C T A G A G T C G T A C A C G T A C T G G T A C C G T A A T C G C G T A G C T A A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

FOXD1/MA0031.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-YAARCMTKCAGAA
GTAAACAT------
 A C G T A G T C G T C A C G T A C T A G A G T C G T A C A C G T A C T G G T A C C G T A A T C G C G T A G C T A
A C T G A C G T G T C A C G T A T C G A G A T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-YAARCMTKCAGAA
GTAAACAA------
 A C G T A G T C G T C A C G T A C T A G A G T C G T A C A C G T A C T G G T A C C G T A A T C G C G T A G C T A
C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--YAARCMTKCAGAA--
AAAATACATGTAAAAAT
 A C G T A C G T A G T C G T C A C G T A C T A G A G T C G T A C A C G T A C T G G T A C C G T A A T C G C G T A G C T A A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:YAARCMTKCAGAA---
---ATATGCAAATNNN
 A G T C G T C A C G T A C T A G A G T C G T A C A C G T A C T G G T A C C G T A A T C G C G T A G C T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A