Information for 17-AGAGHCHABGCTVAAA (Motif 30)

C G T A A C T G C T G A A C T G G A T C A G T C G A T C C G T A A T G C A C T G A G T C A C G T T A G C C G T A T C G A C G T A
Reverse Opposite:
A C G T A G C T C G A T A C T G G T C A A C T G A G T C T A C G C G A T C A T G C T A G C A T G A G T C A G C T A G T C A C G T
p-value:1e-9
log p-value:-2.229e+01
Information Content per bp:1.768
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 32.8bp
Average Position of motif in Background66.8 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:AGAGHCHABGCTVAAA
--------NGCTN---
 C G T A A C T G C T G A A C T G G A T C A G T C G A T C C G T A A T G C A C T G A G T C A C G T T A G C C G T A T C G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AGAGHCHABGCTVAAA
-GAGSCCGAGC-----
 C G T A A C T G C T G A A C T G G A T C A G T C G A T C C G T A A T G C A C T G A G T C A C G T T A G C C G T A T C G A C G T A
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:3
Score:0.49
Offset:1
Orientation:forward strand
Alignment:AGAGHCHABGCTVAAA
-GCGACCACACTG---
 C G T A A C T G C T G A A C T G G A T C A G T C G A T C C G T A A T G C A C T G A G T C A C G T T A G C C G T A T C G A C G T A
A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:4
Score:0.49
Offset:4
Orientation:forward strand
Alignment:AGAGHCHABGCTVAAA-----
----AGGACGCTGTAAAGGGA
 C G T A A C T G C T G A A C T G G A T C A G T C G A T C C G T A A T G C A C T G A G T C A C G T T A G C C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

RXRB/MA0855.1/Jaspar

Match Rank:5
Score:0.48
Offset:0
Orientation:forward strand
Alignment:AGAGHCHABGCTVAAA
GGGGTCAAAGGTCA--
 C G T A A C T G C T G A A C T G G A T C A G T C G A T C C G T A A T G C A C T G A G T C A C G T T A G C C G T A T C G A C G T A
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:6
Score:0.48
Offset:4
Orientation:forward strand
Alignment:AGAGHCHABGCTVAAA-----
----AAGACGCTGTAAAGCGA
 C G T A A C T G C T G A A C T G G A T C A G T C G A T C C G T A A T G C A C T G A G T C A C G T T A G C C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:7
Score:0.48
Offset:4
Orientation:forward strand
Alignment:AGAGHCHABGCTVAAA-----
----AAGACGCTGTAAAGCGA
 C G T A A C T G C T G A A C T G G A T C A G T C G A T C C G T A A T G C A C T G A G T C A C G T T A G C C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

Rxra/MA0512.2/Jaspar

Match Rank:8
Score:0.47
Offset:0
Orientation:forward strand
Alignment:AGAGHCHABGCTVAAA
GGGGTCAAAGGTCA--
 C G T A A C T G C T G A A C T G G A T C A G T C G A T C C G T A A T G C A C T G A G T C A C G T T A G C C G T A T C G A C G T A
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:9
Score:0.46
Offset:0
Orientation:forward strand
Alignment:AGAGHCHABGCTVAAA
GGGGTCAAAGGTCA--
 C G T A A C T G C T G A A C T G G A T C A G T C G A T C C G T A A T G C A C T G A G T C A C G T T A G C C G T A T C G A C G T A
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:10
Score:0.46
Offset:3
Orientation:forward strand
Alignment:AGAGHCHABGCTVAAA--
---GACCACGCCCTTATT
 C G T A A C T G C T G A A C T G G A T C A G T C G A T C C G T A A T G C A C T G A G T C A C G T T A G C C G T A T C G A C G T A A C G T A C G T
A C G T A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T