Information for 3-MGGCCTCCGGACKGCT (Motif 3)

G T A C A C T G A T C G G T A C G T A C A C G T A T G C A G T C C T A G A T C G C G T A A G T C C A G T A C T G T A G C A C G T
Reverse Opposite:
C G T A A C T G A G T C G T C A A C T G A C G T A T G C A G T C T A C G A T C G C G T A A C T G A C T G A T G C A G T C C A T G
p-value:1e-14
log p-value:-3.303e+01
Information Content per bp:1.726
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.1 +/- 24.9bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:MGGCCTCCGGACKGCT
------CCAGACAG--
 G T A C A C T G A T C G G T A C G T A C A C G T A T G C A G T C C T A G A T C G C G T A A G T C C A G T A C T G T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:MGGCCTCCGGACKGCT
------CCAGACRSVB
 G T A C A C T G A T C G G T A C G T A C A C G T A T G C A G T C C T A G A T C G C G T A A G T C C A G T A C T G T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:MGGCCTCCGGACKGCT--
-CAAATCCAGACATCACA
 G T A C A C T G A T C G G T A C G T A C A C G T A T G C A G T C C T A G A T C G C G T A A G T C C A G T A C T G T A G C A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Tcf12/MA0521.1/Jaspar

Match Rank:4
Score:0.53
Offset:9
Orientation:forward strand
Alignment:MGGCCTCCGGACKGCT----
---------AACAGCTGCAG
 G T A C A C T G A T C G G T A C G T A C A C G T A T G C A G T C C T A G A T C G C G T A A G T C C A G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.53
Offset:9
Orientation:forward strand
Alignment:MGGCCTCCGGACKGCT----
---------GACAGCTGCAG
 G T A C A C T G A T C G G T A C G T A C A C G T A T G C A G T C C T A G A T C G C G T A A G T C C A G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.53
Offset:9
Orientation:forward strand
Alignment:MGGCCTCCGGACKGCT-
---------AACAGCTG
 G T A C A C T G A T C G G T A C G T A C A C G T A T G C A G T C C T A G A T C G C G T A A G T C C A G T A C T G T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:MGGCCTCCGGACKGCT
TCACCTCTGGGCAG--
 G T A C A C T G A T C G G T A C G T A C A C G T A T G C A G T C C T A G A T C G C G T A A G T C C A G T A C T G T A G C A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:MGGCCTCCGGACKGCT
GTACATCCGGATTTTT
 G T A C A C T G A T C G G T A C G T A C A C G T A T G C A G T C C T A G A T C G C G T A A G T C C A G T A C T G T A G C A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:MGGCCTCCGGACKGCT---
------NGNGACAGCTGCN
 G T A C A C T G A T C G G T A C G T A C A C G T A T G C A G T C C T A G A T C G C G T A A G T C C A G T A C T G T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:MGGCCTCCGGACKGCT----
----GTATTGACAGCTNNTT
 G T A C A C T G A T C G G T A C G T A C A C G T A T G C A G T C C T A G A T C G C G T A A G T C C A G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T