Information for 8-AGTBCAGCCTGAACAC (Motif 13)

C G T A A T C G A C G T A C G T G A T C C G T A A C T G A T G C G T A C A C G T A C T G T C G A C G T A A G T C G T C A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T A G C T G T A C C G T A A C T G A T C G A G T C A C G T C T A G T C G A G T C A A T G C C G A T
p-value:1e-11
log p-value:-2.574e+01
Information Content per bp:1.787
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.0 +/- 19.1bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGTBCAGCCTGAACAC
---BCAGACWA-----
 C G T A A T C G A C G T A C G T G A T C C G T A A C T G A T G C G T A C A C G T A C T G T C G A C G T A A G T C G T C A A G T C
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGTBCAGCCTGAACAC
NAGGTCACNNTGACC--
 A C G T C G T A A T C G A C G T A C G T G A T C C G T A A C T G A T G C G T A C A C G T A C T G T C G A C G T A A G T C G T C A A G T C
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.50
Offset:8
Orientation:forward strand
Alignment:AGTBCAGCCTGAACAC--
--------ATTAACACCT
 C G T A A T C G A C G T A C G T G A T C C G T A A C T G A T G C G T A C A C G T A C T G T C G A C G T A A G T C G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

TBX20/MA0689.1/Jaspar

Match Rank:4
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:AGTBCAGCCTGAACAC---
--------CTTCACACCTA
 C G T A A T C G A C G T A C G T G A T C C G T A A C T G A T G C G T A C A C G T A C T G T C G A C G T A A G T C G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.49
Offset:5
Orientation:forward strand
Alignment:AGTBCAGCCTGAACAC
-----CGTCTAGACA-
 C G T A A T C G A C G T A C G T G A T C C G T A A C T G A T G C G T A C A C G T A C T G T C G A C G T A A G T C G T C A A G T C
A C G T A C G T A C G T A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.49
Offset:4
Orientation:forward strand
Alignment:AGTBCAGCCTGAACAC
----CAGCC-------
 C G T A A T C G A C G T A C G T G A T C C G T A A C T G A T G C G T A C A C G T A C T G T C G A C G T A A G T C G T C A A G T C
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:AGTBCAGCCTGAACAC---
--------TTTCACACCTN
 C G T A A T C G A C G T A C G T G A T C C G T A A C T G A T G C G T A C A C G T A C T G T C G A C G T A A G T C G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

Pax6/MA0069.1/Jaspar

Match Rank:8
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-AGTBCAGCCTGAACAC
AANTCATGCGTGAA---
 A C G T C G T A A T C G A C G T A C G T G A T C C G T A A C T G A T G C G T A C A C G T A C T G T C G A C G T A A G T C G T C A A G T C
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:forward strand
Alignment:AGTBCAGCCTGAACAC
AGGTCACCCTGACCT-
 C G T A A T C G A C G T A C G T G A T C C G T A A C T G A T G C G T A C A C G T A C T G T C G A C G T A A G T C G T C A A G T C
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.48
Offset:5
Orientation:forward strand
Alignment:AGTBCAGCCTGAACAC
-----WDNCTGGGCA-
 C G T A A T C G A C G T A C G T G A T C C G T A A C T G A T G C G T A C A C G T A C T G T C G A C G T A A G T C G T C A A G T C
A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T