Information for 11-TGGGCACTCAGAC (Motif 15)

A C G T C T A G A C T G A C T G A G T C C G T A A G T C C G A T A G T C C G T A A C T G C G T A T A G C
Reverse Opposite:
A C T G C G A T A G T C A C G T A C T G C G T A A C T G A C G T A C T G A G T C G T A C A G T C C G T A
p-value:1e-9
log p-value:-2.169e+01
Information Content per bp:1.927
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.7 +/- 25.8bp
Average Position of motif in Background28.4 +/- 4.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGCACTCAGAC
NNNNTTGGGCACNNCN--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G A G T C C G T A A G T C C G A T A G T C C G T A A C T G C G T A T A G C
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGGGCACTCAGAC
NGTGGGCAT------
 A C G T A C G T A C G T C T A G A C T G A C T G A G T C C G T A A G T C C G A T A G T C C G T A A C T G C G T A T A G C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGGGCACTCAGAC
-AGCCACTCAAG-
 A C G T C T A G A C T G A C T G A G T C C G T A A G T C C G A T A G T C C G T A A C T G C G T A T A G C
A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGGGCACTCAGAC
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G A G T C C G T A A G T C C G A T A G T C C G T A A C T G C G T A T A G C
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGGGCACTCAGAC
-AAGCACTTAA--
 A C G T C T A G A C T G A C T G A G T C C G T A A G T C C G A T A G T C C G T A A C T G C G T A T A G C
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGGGCACTCAGAC
-AASCACTCAA--
 A C G T C T A G A C T G A C T G A G T C C G T A A G T C C G A T A G T C C G T A A C T G C G T A T A G C
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGGCACTCAGAC
-MRSCACTYAA--
 A C G T C T A G A C T G A C T G A G T C C G T A A G T C C G A T A G T C C G T A A C T G C G T A T A G C
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGGGCACTCAGAC
RGGGCACTAACY-
 A C G T C T A G A C T G A C T G A G T C C G T A A G T C C G A T A G T C C G T A A C T G C G T A T A G C
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGGGCACTCAGAC
WDNCTGGGCA-------
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G A G T C C G T A A G T C C G A T A G T C C G T A A C T G C G T A T A G C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGGGCACTCAGAC---
-GGTCANNGTGACCTN
 A C G T C T A G A C T G A C T G A G T C C G T A A G T C C G A T A G T C C G T A A C T G C G T A T A G C A C G T A C G T A C G T
A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T