Information for 11-AGCAAATATT (Motif 9)

T C G A C A T G G A T C G T C A G T C A T C G A C A G T C G T A A C G T C G A T
Reverse Opposite:
G C T A C G T A G C A T G T C A A C G T C A G T C A G T C T A G G T A C A G C T
p-value:1e-11
log p-value:-2.562e+01
Information Content per bp:1.703
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif6.36%
Number of Background Sequences with motif942.6
Percentage of Background Sequences with motif2.04%
Average Position of motif in Targets55.5 +/- 28.9bp
Average Position of motif in Background50.2 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:AGCAAATATT------
--CTAATATTGCTAAA
 T C G A C A T G G A T C G T C A G T C A T C G A C A G T C G T A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.78
Offset:2
Orientation:forward strand
Alignment:AGCAAATATT------
--CTAATATTGCTAAA
 T C G A C A T G G A T C G T C A G T C A T C G A C A G T C G T A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGCAAATATT
WAAGTAAAYA--
 A C G T A C G T T C G A C A T G G A T C G T C A G T C A T C G A C A G T C G T A A C G T C G A T
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGCAAATATT-
AAACAAACATTC
 A C G T T C G A C A T G G A T C G T C A G T C A T C G A C A G T C G T A A C G T C G A T A C G T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGCAAATATT
---AATTATT
 T C G A C A T G G A T C G T C A G T C A T C G A C A G T C G T A A C G T C G A T
A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T

FOXC1/MA0032.2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGCAAATATT
TATGTAAATAT-
 A C G T A C G T T C G A C A T G G A T C G T C A G T C A T C G A C A G T C G T A A C G T C G A T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGCAAATATT-
-GCAGTGATTT
 T C G A C A T G G A T C G T C A G T C A T C G A C A G T C G T A A C G T C G A T A C G T
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGCAAATATT
TATGTAAATAT-
 A C G T A C G T T C G A C A T G G A T C G T C A G T C A T C G A C A G T C G T A A C G T C G A T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGCAAATATT----
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T T C G A C A T G G A T C G T C A G T C A T C G A C A G T C G T A A C G T C G A T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGCAAATATT----
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T T C G A C A T G G A T C G T C A G T C A T C G A C A G T C G T A A C G T C G A T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T