Information for 11-WTTTTATWRGCCM (Motif 17)

C G A T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C T A G C T A G A T G C A G T C G T C A
Reverse Opposite:
A C G T A C T G A T C G A G T C G A T C C G A T C G T A A C G T C G T A C G T A C G T A C G T A C G T A
p-value:1e-8
log p-value:-1.981e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.5 +/- 19.1bp
Average Position of motif in Background51.2 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD13/MA0909.1/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:WTTTTATWRGCCM
NTTTTATTGG---
 C G A T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C T A G C T A G A T G C A G T C G T C A
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:WTTTTATWRGCCM
TTTTTATTGG---
 C G A T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C T A G C T A G A T G C A G T C G T C A
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:3
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:WTTTTATWRGCCM
NTTTTATTGG---
 C G A T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C T A G C T A G A T G C A G T C G T C A
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:WTTTTATWRGCCM
-TTTTATTRGN--
 C G A T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C T A G C T A G A T G C A G T C G T C A
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.81
Offset:1
Orientation:forward strand
Alignment:WTTTTATWRGCCM
-TTTTATKRGG--
 C G A T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C T A G C T A G A T G C A G T C G T C A
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---WTTTTATWRGCCM
NNAATTTTATTGGNTN
 A C G T A C G T A C G T C G A T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C T A G C T A G A T G C A G T C G T C A
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---WTTTTATWRGCCM
NNANTTTTATTGGNNN
 A C G T A C G T A C G T C G A T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C T A G C T A G A T G C A G T C G T C A
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----WTTTTATWRGCCM
NTNAATTTTATTGNATT
 A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C T A G C T A G A T G C A G T C G T C A
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:9
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:WTTTTATWRGCCM
-TTTAATTGCN--
 C G A T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C T A G C T A G A T G C A G T C G T C A
A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:10
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:WTTTTATWRGCCM
NTTTTATTACN--
 C G A T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C T A G C T A G A T G C A G T C G T C A
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T