Information for 8-GACATHGACADAAGGV (Motif 16)

A C T G C G T A A G T C C G T A A C G T G C T A A C T G G T C A A G T C G T C A C A T G C G T A C T G A A C T G A C T G T A C G
Reverse Opposite:
A G T C G T A C A G T C A G C T A C G T G T A C A C G T A C T G A C G T A G T C C A G T C G T A C G A T A C T G A C G T G T A C
p-value:1e-8
log p-value:-1.972e+01
Information Content per bp:1.783
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.2 +/- 16.6bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GACATHGACADAAGGV--
----CCGCCCAAGGGCAG
 A C T G C G T A A G T C C G T A A C G T G C T A A C T G G T C A A G T C G T C A C A T G C G T A C T G A A C T G A C T G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

Hnf4a/MA0114.3/Jaspar

Match Rank:2
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GACATHGACADAAGGV
ATTGGACTTTGACCCC----
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T G C T A A C T G G T C A A G T C G T C A C A T G C G T A C T G A A C T G A C T G T A C G
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GACATHGACADAAGGV--
----TTGCCCTAGGGCAT
 A C T G C G T A A G T C C G T A A C G T G C T A A C T G G T C A A G T C G T C A C A T G C G T A C T G A A C T G A C T G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GACATHGACADAAGGV
NATGACCTTGA--------
 A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T G C T A A C T G G T C A A G T C G T C A C A T G C G T A C T G A A C T G A C T G T A C G
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GACATHGACADAAGGV-
-AAACAGACAAAGGAAT
 A C T G C G T A A G T C C G T A A C G T G C T A A C T G G T C A A G T C G T C A C A T G C G T A C T G A A C T G A C T G T A C G A C G T
A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Esrra/MA0592.2/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GACATHGACADAAGGV
ATGACCTTGAA-------
 A C G T A C G T A C T G C G T A A G T C C G T A A C G T G C T A A C T G G T C A A G T C G T C A C A T G C G T A C T G A A C T G A C T G T A C G
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GACATHGACADAAGGV
TGACCTTGACCT-----
 A C G T A C T G C G T A A G T C C G T A A C G T G C T A A C T G G T C A A G T C G T C A C A T G C G T A C T G A A C T G A C T G T A C G
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:8
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GACATHGACADAAGGV-
-------NNATAAGGNN
 A C T G C G T A A G T C C G T A A C G T G C T A A C T G G T C A A G T C G T C A C A T G C G T A C T G A A C T G A C T G T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GACATHGACADAAGGV
TGACCTTGAV-------
 A C G T A C T G C G T A A G T C C G T A A C G T G C T A A C T G G T C A A G T C G T C A C A T G C G T A C T G A A C T G A C T G T A C G
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GACATHGACADAAGGV
ATGACCTTGA--------
 A C G T A C G T A C T G C G T A A G T C C G T A A C G T G C T A A C T G G T C A A G T C G T C A C A T G C G T A C T G A A C T G A C T G T A C G
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T