Information for 5-ACAAATATTTGTBHAG (Motif 10)

C G T A G T A C C G T A C G T A C G T A A C G T C G T A A G C T A C G T A C G T A C T G A C G T A C G T G C T A G T C A C T A G
Reverse Opposite:
G A T C C A G T C A G T T G C A G T C A A G T C C G T A C G T A C T G A A C G T C G T A A C G T A C G T A C G T C A T G A C G T
p-value:1e-11
log p-value:-2.547e+01
Information Content per bp:1.846
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.4 +/- 20.3bp
Average Position of motif in Background44.1 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ACAAATATTTGTBHAG
NNTNNCAATATTAG-----
 A C G T A C G T A C G T C G T A G T A C C G T A C G T A C G T A A C G T C G T A A G C T A C G T A C G T A C T G A C G T A C G T G C T A G T C A C T A G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ACAAATATTTGTBHAG
NNTNNCAATATTAG-----
 A C G T A C G T A C G T C G T A G T A C C G T A C G T A C G T A A C G T C G T A A G C T A C G T A C G T A C T G A C G T A C G T G C T A G T C A C T A G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ACAAATATTTGTBHAG
--GAATGTTTGTTT--
 C G T A G T A C C G T A C G T A C G T A A C G T C G T A A G C T A C G T A C G T A C T G A C G T A C G T G C T A G T C A C T A G
A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ACAAATATTTGTBHAG
---AATAATT------
 C G T A G T A C C G T A C G T A C G T A A C G T C G T A A G C T A C G T A C G T A C T G A C G T A C G T G C T A G T C A C T A G
A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACAAATATTTGTBHAG--
-GGAAAAATTGTTAGGAA
 C G T A G T A C C G T A C G T A C G T A A C G T C G T A A G C T A C G T A C G T A C T G A C G T A C G T G C T A G T C A C T A G A C G T A C G T
A C G T T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0172.1_Sox1_2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ACAAATATTTGTBHAG-
--CTATAATTGTTAGCG
 C G T A G T A C C G T A C G T A C G T A A C G T C G T A A G C T A C G T A C G T A C T G A C G T A C G T G C T A G T C A C T A G A C G T
A C G T A C G T G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ACAAATATTTGTBHAG--
----AAAATTGTTATGAA
 C G T A G T A C C G T A C G T A C G T A A C G T C G T A A G C T A C G T A C G T A C T G A C G T A C G T G C T A G T C A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACAAATATTTGTBHAG
DCYAAAAATAGM-------
 A C G T A C G T A C G T C G T A G T A C C G T A C G T A C G T A A C G T C G T A A G C T A C G T A C G T A C T G A C G T A C G T G C T A G T C A C T A G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACAAATATTTGTBHAG--
--AANTTATTGTTCTNNA
 C G T A G T A C C G T A C G T A C G T A A C G T C G T A A G C T A C G T A C G T A C T G A C G T A C G T G C T A G T C A C T A G A C G T A C G T
A C G T A C G T C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

BHLHE23/MA0817.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ACAAATATTTGTBHAG
--AAACATATGTTT--
 C G T A G T A C C G T A C G T A C G T A A C G T C G T A A G C T A C G T A C G T A C T G A C G T A C G T G C T A G T C A C T A G
A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T A C G T A C G T