Information for 2-TDTGTTTGCTTTGCCT (Motif 6)

A C G T C A T G A C G T A T C G A C G T A C G T A C G T T C A G A G T C A C G T A C G T A C G T T C A G G T A C A G T C A G C T
Reverse Opposite:
C T G A A C T G A C T G A G T C G T C A G T C A C G T A C T A G A G T C C G T A G T C A C G T A A T G C C G T A G A T C C G T A
p-value:1e-13
log p-value:-3.163e+01
Information Content per bp:1.811
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 6.8bp
Average Position of motif in Background83.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TDTGTTTGCTTTGCCT
NNTGTTTATTTTGGCA
 A C G T C A T G A C G T A T C G A C G T A C G T A C G T T C A G A G T C A C G T A C G T A C G T T C A G G T A C A G T C A G C T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

FOXP1/MA0481.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TDTGTTTGCTTTGCCT
CTTTGTTTACTTTTN--
 A C G T A C G T C A T G A C G T A T C G A C G T A C G T A C G T T C A G A G T C A C G T A C G T A C G T T C A G G T A C A G T C A G C T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TDTGTTTGCTTTGCCT
--TGTTTACTTT----
 A C G T C A T G A C G T A T C G A C G T A C G T A C G T T C A G A G T C A C G T A C G T A C G T T C A G G T A C A G T C A G C T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TDTGTTTGCTTTGCCT
--TGTTTACTTT----
 A C G T C A T G A C G T A T C G A C G T A C G T A C G T T C A G A G T C A C G T A C G T A C G T T C A G G T A C A G T C A G C T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TDTGTTTGCTTTGCCT
NNNNTTTGTTTACNNT----
 A C G T A C G T A C G T A C G T A C G T C A T G A C G T A T C G A C G T A C G T A C G T T C A G A G T C A C G T A C G T A C G T T C A G G T A C A G T C A G C T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TDTGTTTGCTTTGCCT
--TGTTTATTT-----
 A C G T C A T G A C G T A T C G A C G T A C G T A C G T T C A G A G T C A C G T A C G T A C G T T C A G G T A C A G T C A G C T
A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TDTGTTTGCTTTGCCT
TTTGTTTACTTA----
 A C G T C A T G A C G T A T C G A C G T A C G T A C G T T C A G A G T C A C G T A C G T A C G T T C A G G T A C A G T C A G C T
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TDTGTTTGCTTTGCCT
--TRTTTACTTW----
 A C G T C A T G A C G T A T C G A C G T A C G T A C G T T C A G A G T C A C G T A C G T A C G T T C A G G T A C A G T C A G C T
A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TDTGTTTGCTTTGCCT
TCCATGTTTACTTTG---
 A C G T A C G T A C G T C A T G A C G T A T C G A C G T A C G T A C G T T C A G A G T C A C G T A C G T A C G T T C A G G T A C A G T C A G C T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TDTGTTTGCTTTGCCT
GAATGTTTGTTT-----
 A C G T A C G T C A T G A C G T A T C G A C G T A C G T A C G T T C A G A G T C A C G T A C G T A C G T T C A G G T A C A G T C A G C T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T A C G T A C G T