Information for 5-GRRACTGACCTTC (Motif 4)

C A T G C T A G C T A G C G T A A G T C A C G T C T A G C G T A A G T C A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C T G A C G T G A C T G A C T G A T C
p-value:1e-13
log p-value:-3.163e+01
Information Content per bp:1.902
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.5 +/- 17.9bp
Average Position of motif in Background33.4 +/- 3.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.73
Offset:4
Orientation:forward strand
Alignment:GRRACTGACCTTC-
----NTGACCTTGA
 C A T G C T A G C T A G C G T A A G T C A C G T C T A G C G T A A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Esrrg/MA0643.1/Jaspar

Match Rank:2
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:GRRACTGACCTTC-
----ATGACCTTGA
 C A T G C T A G C T A G C G T A A G T C A C G T C T A G C G T A A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:GRRACTGACCTTC
----GTGACCTT-
 C A T G C T A G C T A G C G T A A G T C A C G T C T A G C G T A A G T C A G T C A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GRRACTGACCTTC-
----CTGACCTTTG
 C A T G C T A G C T A G C G T A A G T C A C G T C T A G C G T A A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:GRRACTGACCTTC--
-----TGACCTTGAT
 C A T G C T A G C T A G C G T A A G T C A C G T C T A G C G T A A G T C A G T C A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:GRRACTGACCTTC
-----TGACCT--
 C A T G C T A G C T A G C G T A A G T C A C G T C T A G C G T A A G T C A G T C A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GRRACTGACCTTC
-NNACTTACCTN-
 C A T G C T A G C T A G C G T A A G T C A C G T C T A G C G T A A G T C A G T C A C G T A C G T A G T C
A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.68
Offset:5
Orientation:forward strand
Alignment:GRRACTGACCTTC----
-----TGACCTTTNCNT
 C A T G C T A G C T A G C G T A A G T C A C G T C T A G C G T A A G T C A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GRRACTGACCTTC-
---NATGACCTTGA
 C A T G C T A G C T A G C G T A A G T C A C G T C T A G C G T A A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:GRRACTGACCTTC--
-----TGACCTTGAV
 C A T G C T A G C T A G C G T A A G T C A C G T C T A G C G T A A G T C A G T C A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A