Information for 18-TTTATGGGAATGG (Motif 28)

C G A T G A C T C A G T C G T A C A G T A C T G C T A G T C A G T C G A G T C A C G A T A C T G C A T G
Reverse Opposite:
G T A C G T A C C G T A A C G T A G C T A G T C G A T C G T A C G T C A G A C T G T C A C T G A C G T A
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.658
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.34%
Number of Background Sequences with motif340.8
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets47.8 +/- 24.1bp
Average Position of motif in Background51.3 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F1/MA0786.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTTATGGGAATGG
-TTATGCAAATTA
 C G A T G A C T C A G T C G T A C A G T A C T G C T A G T C A G T C G A G T C A C G A T A C T G C A T G
A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU3F2/MA0787.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTTATGGGAATGG
-TTATGCAAATTA
 C G A T G A C T C A G T C G T A C A G T A C T G C T A G T C A G T C G A G T C A C G A T A C T G C A T G
A C G T C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

POU2F1/MA0785.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTTATGGGAATGG
AATATGCAAATT-
 C G A T G A C T C A G T C G T A C A G T A C T G C T A G T C A G T C G A G T C A C G A T A C T G C A T G
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TTTATGGGAATGG
--TATGCAAAT--
 C G A T G A C T C A G T C G T A C A G T A C T G C T A G T C A G T C G A G T C A C G A T A C T G C A T G
A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TTTATGGGAATGG
--TATGCAAAT--
 C G A T G A C T C A G T C G T A C A G T A C T G C T A G T C A G T C G A G T C A C G A T A C T G C A T G
A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TTTATGGGAATGG-
--WATGCAAATGAG
 C G A T G A C T C A G T C G T A C A G T A C T G C T A G T C A G T C G A G T C A C G A T A C T G C A T G A C G T
A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTTATGGGAATGG
-TTATGCAAAT--
 C G A T G A C T C A G T C G T A C A G T A C T G C T A G T C A G T C G A G T C A C G A T A C T G C A T G
A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTTATGGGAATGG
ATTATGCTAATTT
 C G A T G A C T C A G T C G T A C A G T A C T G C T A G T C A G T C G A G T C A C G A T A C T G C A T G
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTTATGGGAATGG-
--TATGCWAATBAV
 C G A T G A C T C A G T C G T A C A G T A C T G C T A G T C A G T C G A G T C A C G A T A C T G C A T G A C G T
A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

POU1F1/MA0784.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTTATGGGAATGG-
AATATGCAAATTAG
 C G A T G A C T C A G T C G T A C A G T A C T G C T A G T C A G T C G A G T C A C G A T A C T G C A T G A C G T
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G