Information for 17-ATAAATCWACATCATG (Motif 27)

G C T A C A G T G T C A C G T A C G T A A G C T T A G C C G T A C T G A A G T C C G T A A C G T A G T C G T C A A C G T A C T G
Reverse Opposite:
G T A C G T C A C A G T T C A G C G T A C G A T A C T G A G C T C G A T A C T G C T G A C G A T C G A T A C G T G T C A C G A T
p-value:1e-9
log p-value:-2.202e+01
Information Content per bp:1.720
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.8 +/- 23.9bp
Average Position of motif in Background39.1 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATAAATCWACATCATG
ATGAATATTCATGAG-
 G C T A C A G T G T C A C G T A C G T A A G C T T A G C C G T A C T G A A G T C C G T A A C G T A G T C G T C A A C G T A C T G
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATAAATCWACATCATG
--AAATTAGCATAAT-
 G C T A C A G T G T C A C G T A C G T A A G C T T A G C C G T A C T G A A G T C C G T A A C G T A G T C G T C A A C G T A C T G
A C G T A C G T G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATAAATCWACATCATG
--AAACAAACATTC--
 G C T A C A G T G T C A C G T A C G T A A G C T T A G C C G T A C T G A A G T C C G T A A C G T A G T C G T C A A C G T A C T G
A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ATAAATCWACATCATG
--TAATTTGCATAA--
 G C T A C A G T G T C A C G T A C G T A A G C T T A G C C G T A C T G A A G T C C G T A A C G T A G T C G T C A A C G T A C T G
A C G T A C G T C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ATAAATCWACATCATG
--AAATAAACA-----
 G C T A C A G T G T C A C G T A C G T A A G C T T A G C C G T A C T G A A G T C C G T A A C G T A G T C G T C A A C G T A C T G
A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ATAAATCWACATCATG
---AATTTGCATANT-
 G C T A C A G T G T C A C G T A C G T A A G C T T A G C C G T A C T G A A G T C C G T A A C G T A G T C G T C A A C G T A C T G
A C G T A C G T A C G T G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ATAAATCWACATCATG
AYATGYATATGCATR---
 A C G T A C G T G C T A C A G T G T C A C G T A C G T A A G C T T A G C C G T A C T G A A G T C C G T A A C G T A G T C G T C A A C G T A C T G
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATAAATCWACATCATG
-TATGTAAATAT----
 G C T A C A G T G T C A C G T A C G T A A G C T T A G C C G T A C T G A A G T C C G T A A C G T A G T C G T C A A C G T A C T G
A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATAAATCWACATCATG
-BTVATTWGCATA---
 G C T A C A G T G T C A C G T A C G T A A G C T T A G C C G T A C T G A A G T C C G T A A C G T A G T C G T C A A C G T A C T G
A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATAAATCWACATCATG
TCCAATCCACA-----
 G C T A C A G T G T C A C G T A C G T A A G C T T A G C C G T A C T G A A G T C C G T A A C G T A G T C G T C A A C G T A C T G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T