p-value: | 1e-10 |
log p-value: | -2.325e+01 |
Information Content per bp: | 1.617 |
Number of Target Sequences with motif | 19.0 |
Percentage of Target Sequences with motif | 2.54% |
Number of Background Sequences with motif | 174.3 |
Percentage of Background Sequences with motif | 0.36% |
Average Position of motif in Targets | 54.2 +/- 23.3bp |
Average Position of motif in Background | 48.0 +/- 29.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTGACMTSATGBCAC -TTGGCATGGTGCCA- |
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Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 2 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCTGACMTSATGBCAC -CTGGCAGNCTGCCA- |
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NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCTGACMTSATGBCAC CTTGGCANNNTGCCAA |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | GCTGACMTSATGBCAC --------CTTGGCAA |
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Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | GCTGACMTSATGBCAC -------ARNTGACA- |
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c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer
Match Rank: | 6 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCTGACMTSATGBCAC NGATGACGTCAT----- |
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JUN/MA0488.1/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GCTGACMTSATGBCAC ---AAGATGATGTCAT |
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Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | GCTGACMTSATGBCAC --------RHTGWCAR |
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Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | GCTGACMTSATGBCAC- -------VGCTGWCAVB |
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MEIS3/MA0775.1/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | GCTGACMTSATGBCAC --------CCTGTCAA |
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