Information for 12-CCWATCAAGCCAG (Motif 17)

A T G C A G T C C G A T C G T A A C G T A T G C C G T A C G T A A T C G G T A C A G T C C G T A A T C G
Reverse Opposite:
A T G C A C G T A C T G A C T G A T G C A C G T A C G T T A C G G T C A A C G T C G T A C T A G A T C G
p-value:1e-11
log p-value:-2.566e+01
Information Content per bp:1.832
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.8 +/- 31.8bp
Average Position of motif in Background49.6 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0026.1_Duxbl/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCWATCAAGCCAG
CGACCCAATCAACGGTG
 A C G T A C G T A C G T A C G T A T G C A G T C C G A T C G T A A C G T A T G C C G T A C G T A A T C G G T A C A G T C C G T A A T C G
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCWATCAAGCCAG
CCAATCAA-----
 A T G C A G T C C G A T C G T A A C G T A T G C C G T A C G T A A T C G G T A C A G T C C G T A A T C G
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCWATCAAGCCAG
---ATCACCCCAT
 A T G C A G T C C G A T C G T A A C G T A T G C C G T A C G T A A T C G G T A C A G T C C G T A A T C G
A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CCWATCAAGCCAG---
------ATGCCAGACN
 A T G C A G T C C G A T C G T A A C G T A T G C C G T A C G T A A T C G G T A C A G T C C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCWATCAAGCCAG
-CNGTCACGCCAC
 A T G C A G T C C G A T C G T A A C G T A T G C C G T A C G T A A T C G G T A C A G T C C G T A A T C G
A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCWATCAAGCCAG
---ATCACCCCAT
 A T G C A G T C C G A T C G T A A C G T A T G C C G T A C G T A A T C G G T A C A G T C C G T A A T C G
A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCWATCAAGCCAG
---ATCACCCCAC
 A T G C A G T C C G A T C G T A A C G T A T G C C G T A C G T A A T C G G T A C A G T C C G T A A T C G
A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

HOXB13/MA0901.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCWATCAAGCCAG
CCAATAAAAC---
 A T G C A G T C C G A T C G T A A C G T A T G C C G T A C G T A A T C G G T A C A G T C C G T A A T C G
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCWATCAAGCCAG
CCAATAAAAA---
 A T G C A G T C C G A T C G T A A C G T A T G C C G T A C G T A A T C G G T A C A G T C C G T A A T C G
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCWATCAAGCCAG
-CCATCAATCAAA
 A T G C A G T C C G A T C G T A A C G T A T G C C G T A C G T A A T C G G T A C A G T C C G T A A T C G
A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A