Information for 7-ACTAGGTAAATAT (Motif 9)

T C G A T G A C C G A T C T G A C T A G A C T G A C G T T G C A C T G A C G T A A C G T C G T A A C G T
Reverse Opposite:
C G T A G C A T C G T A C G A T A G C T A C G T T G C A T G A C G A T C A G C T C G T A A C T G A G C T
p-value:1e-13
log p-value:-3.045e+01
Information Content per bp:1.684
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.73%
Number of Background Sequences with motif125.0
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets47.4 +/- 26.7bp
Average Position of motif in Background50.2 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.77
Offset:2
Orientation:forward strand
Alignment:ACTAGGTAAATAT
--TATGTAAATAT
 T C G A T G A C C G A T C T G A C T A G A C T G A C G T T G C A C T G A C G T A A C G T C G T A A C G T
A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

FOXC1/MA0032.2/Jaspar

Match Rank:2
Score:0.75
Offset:2
Orientation:forward strand
Alignment:ACTAGGTAAATAT
--TATGTAAATAT
 T C G A T G A C C G A T C T G A C T A G A C T G A C G T T G C A C T G A C G T A A C G T C G T A A C G T
A C G T A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:ACTAGGTAAATAT
--WAAGTAAAYA-
 T C G A T G A C C G A T C T G A C T A G A C T G A C G T T G C A C T G A C G T A A C G T C G T A A C G T
A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ACTAGGTAAATAT---
-CAAAGTAAACANNNN
 T C G A T G A C C G A T C T G A C T A G A C T G A C G T T G C A C T G A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACTAGGTAAATAT
NCTAAGTAAACA-
 T C G A T G A C C G A T C T G A C T A G A C T G A C G T T G C A C T G A C G T A A C G T C G T A A C G T
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACTAGGTAAATAT--
NCWRWGTAAACANSV
 T C G A T G A C C G A T C T G A C T A G A C T G A C G T T G C A C T G A C G T A A C G T C G T A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ACTAGGTAAATAT
--AAAGTAAACA-
 T C G A T G A C C G A T C T G A C T A G A C T G A C G T T G C A C T G A C G T A A C G T C G T A A C G T
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ACTAGGTAAATAT
--AAAGTAAACA-
 T C G A T G A C C G A T C T G A C T A G A C T G A C G T T G C A C T G A C G T A A C G T C G T A A C G T
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ACTAGGTAAATAT-
--TAAGTAAACAAA
 T C G A T G A C C G A T C T G A C T A G A C T G A C G T T G C A C T G A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

PB0163.1_Six6_2/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACTAGGTAAATAT-----
-ANNNGGATATATCCNNN
 T C G A T G A C C G A T C T G A C T A G A C T G A C G T T G C A C T G A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T