Information for 11-CACTGTACTC (Motif 20)

A T G C C T G A A T G C A C G T A C T G A C G T C G T A A T G C A G C T G A T C
Reverse Opposite:
C T A G T C G A T A C G G C A T G T C A T G A C T C G A A T C G A G C T A T C G
p-value:1e-10
log p-value:-2.505e+01
Information Content per bp:1.718
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.64%
Number of Background Sequences with motif517.0
Percentage of Background Sequences with motif1.14%
Average Position of motif in Targets46.0 +/- 26.6bp
Average Position of motif in Background49.3 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----CACTGTACTC--
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C G T A T G C C T G A A T G C A C G T A C T G A C G T C G T A A T G C A G C T G A T C A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CACTGTACTC--
--CTGTTCCTGG
 A T G C C T G A A T G C A C G T A C T G A C G T C G T A A T G C A G C T G A T C A C G T A C G T
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CACTGTACTC
CTTTGT----
 A T G C C T G A A T G C A C G T A C T G A C G T C G T A A T G C A G C T G A T C
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CACTGTACTC-----
TTCNAAGTACTTNNNNN
 A C G T A C G T A T G C C T G A A T G C A C G T A C T G A C G T C G T A A T G C A G C T G A T C A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CACTGTACTC
NSCACTYVAV--
 A C G T A C G T A T G C C T G A A T G C A C G T A C T G A C G T C G T A A T G C A G C T G A T C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CACTGTACTC
MRSCACTYAA---
 A C G T A C G T A C G T A T G C C T G A A T G C A C G T A C T G A C G T C G T A A T G C A G C T G A T C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CACTGTACTC
CCATTGTTTT-
 A C G T A T G C C T G A A T G C A C G T A C T G A C G T C G T A A T G C A G C T G A T C
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CACTGTACTC-
GHTACAWTGTADCHR
 A C G T A C G T A C G T A C G T A T G C C T G A A T G C A C G T A C T G A C G T C G T A A T G C A G C T G A T C A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CACTGTACTC
CCATTGTTYB-
 A C G T A T G C C T G A A T G C A C G T A C T G A C G T C G T A A T G C A G C T G A T C
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CACTGTACTC
CCWTTGTYYB-
 A C G T A T G C C T G A A T G C A C G T A C T G A C G T C G T A A T G C A G C T G A T C
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T