Information for 2-TTRTTTRTTTAKC (Motif 2)

A C G T A C G T T C A G A G C T A C G T A C G T C T G A G A C T C G A T A C G T C G T A C A T G T A G C
Reverse Opposite:
A T C G G T A C G C A T T G C A G C T A C T G A G A C T C G T A T G C A C T G A A G T C G T C A T G C A
p-value:1e-30
log p-value:-7.050e+01
Information Content per bp:1.632
Number of Target Sequences with motif107.0
Percentage of Target Sequences with motif14.62%
Number of Background Sequences with motif1768.8
Percentage of Background Sequences with motif3.90%
Average Position of motif in Targets57.0 +/- 23.3bp
Average Position of motif in Background50.7 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0005.1_Forkhead_class/Jaspar

Match Rank:1
Score:0.86
Offset:1
Orientation:forward strand
Alignment:TTRTTTRTTTAKC
-TGTTTATTT---
 A C G T A C G T T C A G A G C T A C G T A C G T C T G A G A C T C G A T A C G T C G T A C A T G T A G C
A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:2
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-TTRTTTRTTTAKC
TTTGTTTACTTA--
 A C G T A C G T A C G T T C A G A G C T A C G T A C G T C T G A G A C T C G A T A C G T C G T A C A T G T A G C
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.85
Offset:1
Orientation:forward strand
Alignment:TTRTTTRTTTAKC
-TRTTTACTTW--
 A C G T A C G T T C A G A G C T A C G T A C G T C T G A G A C T C G A T A C G T C G T A C A T G T A G C
A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:TTRTTTRTTTAKC
-TGTTTACTTT--
 A C G T A C G T T C A G A G C T A C G T A C G T C T G A G A C T C G A T A C G T C G T A C A T G T A G C
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:TTRTTTRTTTAKC
-TGTTTACTTT--
 A C G T A C G T T C A G A G C T A C G T A C G T C T G A G A C T C G A T A C G T C G T A C A T G T A G C
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--TTRTTTRTTTAKC
GAATGTTTGTTT---
 A C G T A C G T A C G T A C G T T C A G A G C T A C G T A C G T C T G A G A C T C G A T A C G T C G T A C A T G T A G C
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:7
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:TTRTTTRTTTAKC
ATATTTACATA--
 A C G T A C G T T C A G A G C T A C G T A C G T C T G A G A C T C G A T A C G T C G T A C A T G T A G C
C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:8
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---TTRTTTRTTTAKC
TCCATGTTTACTTTG-
 A C G T A C G T A C G T A C G T A C G T T C A G A G C T A C G T A C G T C T G A G A C T C G A T A C G T C G T A C A T G T A G C
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:9
Score:0.80
Offset:1
Orientation:forward strand
Alignment:TTRTTTRTTTAKC
-TGTTTACTTAGG
 A C G T A C G T T C A G A G C T A C G T A C G T C T G A G A C T C G A T A C G T C G T A C A T G T A G C
A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----TTRTTTRTTTAKC
NNNTTTGTTTACTTTTN
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T A C G T A C G T C T G A G A C T C G A T A C G T C G T A C A T G T A G C
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T