Information for 9-CTTTTTTCTGCCTTTT (Motif 9)

A T G C A G C T A C G T A C G T C G A T C G A T A G C T A G T C A C G T A C T G A G T C A G T C C G A T A C G T A G C T A G C T
Reverse Opposite:
C T G A C T G A G T C A C G T A C T A G A C T G G T A C C G T A A C T G C T G A C G T A C G T A C G T A C G T A C T G A A T C G
p-value:1e-16
log p-value:-3.715e+01
Information Content per bp:1.811
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.1 +/- 24.2bp
Average Position of motif in Background66.2 +/- 8.1bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTTTCTGCCTTTT
NNNNTTGTGTGCTTNN-
 A C G T A T G C A G C T A C G T A C G T C G A T C G A T A G C T A G T C A C G T A C T G A G T C A G T C C G A T A C G T A G C T A G C T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

GATA3/MA0037.2/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTTTTTTCTGCCTTTT
-TCTTATCT-------
 A T G C A G C T A C G T A C G T C G A T C G A T A G C T A G T C A C G T A C T G A G T C A G T C C G A T A C G T A G C T A G C T
A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTTTTTTCTGCCTTTT
-ANATTTTTGCAANTN
 A T G C A G C T A C G T A C G T C G A T C G A T A G C T A G T C A C G T A C T G A G T C A G T C C G A T A C G T A G C T A G C T
A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

Gata4/MA0482.1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTTTTTTCTGCCTTTT
-TCTTATCTCCC----
 A T G C A G C T A C G T A C G T C G A T C G A T A G C T A G T C A C G T A C T G A G T C A G T C C G A T A C G T A G C T A G C T
A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C A C G T A C G T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTTTTTTCTGCCTTTT
CTTTGTTATGCAAAT-
 A T G C A G C T A C G T A C G T C G A T C G A T A G C T A G T C A C G T A C T G A G T C A G T C C G A T A C G T A G C T A G C T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CTTTTTTCTGCCTTTT
--ATTTCCTGTN----
 A T G C A G C T A C G T A C G T C G A T C G A T A G C T A G T C A C G T A C T G A G T C A G T C C G A T A C G T A G C T A G C T
A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTTTTTTCTGCCTTTT
CATTGTTATGCAAAT-
 A T G C A G C T A C G T A C G T C G A T C G A T A G C T A G T C A C G T A C T G A G T C A G T C C G A T A C G T A G C T A G C T
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTTTTTTCTGCCTTTT
--DTTTCCCGCC----
 A T G C A G C T A C G T A C G T C G A T C G A T A G C T A G T C A C G T A C T G A G T C A G T C C G A T A C G T A G C T A G C T
A C G T A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTTTCTGCCTTTT
ANTCCTTTGTCTNNNN---
 A C G T A C G T A C G T A T G C A G C T A C G T A C G T C G A T C G A T A G C T A G T C A C G T A C T G A G T C A G T C C G A T A C G T A G C T A G C T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CTTTTTTCTGCCTTTT
----GGTCTGGCAT--
 A T G C A G C T A C G T A C G T C G A T C G A T A G C T A G T C A C G T A C T G A G T C A G T C C G A T A C G T A G C T A G C T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T