Information for 14-CACWCWCTCATTYTTT (Motif 27)

A G T C C G T A A G T C C G T A G A T C C G A T T A G C G C A T A G T C C G T A G A C T A C G T A G T C A C G T A G C T C G A T
Reverse Opposite:
C G T A C T G A C G T A C T A G G T C A C T G A C G A T A C T G C G T A A C T G C G T A C A T G C G A T A C T G C G A T C T A G
p-value:1e-5
log p-value:-1.306e+01
Information Content per bp:1.705
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif83.9
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets39.4 +/- 19.7bp
Average Position of motif in Background52.3 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox1/MA0870.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CACWCWCTCATTYTTT
AACAATAACATTGTT-
 A G T C C G T A A G T C C G T A G A T C C G A T T A G C G C A T A G T C C G T A G A C T A C G T A G T C A C G T A G C T C G A T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CACWCWCTCATTYTTT
-TCACTTTCACTTTCN
 A G T C C G T A A G T C C G T A G A T C C G A T T A G C G C A T A G T C C G T A G A C T A C G T A G T C A C G T A G C T C G A T
A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

SOX21/MA0866.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACWCWCTCATTYTTT
AACACTACCATTGTT-
 A G T C C G T A A G T C C G T A G A T C C G A T T A G C G C A T A G T C C G T A G A C T A C G T A G T C A C G T A G C T C G A T
T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CACWCWCTCATTYTTT------
--NTGACTCANTTTTTCCANTN
 A G T C C G T A A G T C C G T A G A T C C G A T T A G C G C A T A G T C C G T A G A C T A C G T A G T C A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CACWCWCTCATTYTTT
AGCGGCACACACGCAA-----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A G A T C C G A T T A G C G C A T A G T C C G T A G A C T A C G T A G T C A C G T A G C T C G A T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:6
Score:0.51
Offset:7
Orientation:forward strand
Alignment:CACWCWCTCATTYTTT
-------TCAGTCTT-
 A G T C C G T A A G T C C G T A G A T C C G A T T A G C G C A T A G T C C G T A G A C T A C G T A G T C A C G T A G C T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T

Sox11/MA0869.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CACWCWCTCATTYTTT
AACAATTTCAGTGTT-
 A G T C C G T A A G T C C G T A G A T C C G A T T A G C G C A T A G T C C G T A G A C T A C G T A G T C A C G T A G C T C G A T
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CACWCWCTCATTYTTT
---ACTTTCACTTTC-
 A G T C C G T A A G T C C G T A G A T C C G A T T A G C G C A T A G T C C G T A G A C T A C G T A G T C A C G T A G C T C G A T
A C G T A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CACWCWCTCATTYTTT
-ACTTTCACTTTC---
 A G T C C G T A A G T C C G T A G A T C C G A T T A G C G C A T A G T C C G T A G A C T A C G T A G T C A C G T A G C T C G A T
A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CACWCWCTCATTYTTT
TACTTCCGCTTTTT--
 A G T C C G T A A G T C C G T A G A T C C G A T T A G C G C A T A G T C C G T A G A C T A C G T A G T C A C G T A G C T C G A T
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T A C G T A C G T