Information for 12-GGCGTCACGT (Motif 24)

C T A G C T A G A G T C A T C G A C G T A T G C C T G A A G T C A C T G A G C T
Reverse Opposite:
C T G A A G T C A C T G A G C T A T C G C G T A A T G C C T A G G A T C A G T C
p-value:1e-7
log p-value:-1.700e+01
Information Content per bp:1.797
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif40.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets55.5 +/- 34.3bp
Average Position of motif in Background39.1 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.79
Offset:2
Orientation:forward strand
Alignment:GGCGTCACGT
--AGTCACGC
 C T A G C T A G A G T C A T C G A C G T A T G C C T G A A G T C A C T G A G C T
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.79
Offset:2
Orientation:forward strand
Alignment:GGCGTCACGT--
--GGTCACGTGC
 C T A G C T A G A G T C A T C G A C G T A T G C C T G A A G T C A C T G A G C T A C G T A C G T
A C G T A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

BHLHE41/MA0636.1/Jaspar

Match Rank:3
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:GGCGTCACGT---
---GTCACGTGAC
 C T A G C T A G A G T C A T C G A C G T A T G C C T G A A G T C A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C

E-box(bHLH)/Promoter/Homer

Match Rank:4
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GGCGTCACGT--
CCGGTCACGTGA
 C T A G C T A G A G T C A T C G A C G T A T G C C T G A A G T C A C T G A G C T A C G T A C G T
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

Mitf/MA0620.1/Jaspar

Match Rank:5
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GGCGTCACGT--
--GGTCACGTGG
 C T A G C T A G A G T C A T C G A C G T A T G C C T G A A G T C A C T G A G C T A C G T A C G T
A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GGCGTCACGT--
--GGTCACGTGA
 C T A G C T A G A G T C A T C G A C G T A T G C C T G A A G T C A C T G A G C T A C G T A C G T
A C G T A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

TFEB/MA0692.1/Jaspar

Match Rank:7
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:GGCGTCACGT---
---GTCACGTGAT
 C T A G C T A G A G T C A T C G A C G T A T G C C T G A A G T C A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

TFE3/MA0831.1/Jaspar

Match Rank:8
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:GGCGTCACGT---
---GTCACGTGNT
 C T A G C T A G A G T C A T C G A C G T A T G C C T G A A G T C A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:9
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:GGCGTCACGT-
---BGCACGTA
 C T A G C T A G A G T C A T C G A C G T A T G C C T G A A G T C A C T G A G C T A C G T
A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

BHLHE40/MA0464.2/Jaspar

Match Rank:10
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:GGCGTCACGT---
---GTCACGTGAN
 C T A G C T A G A G T C A T C G A C G T A T G C C T G A A G T C A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T