Information for 13-AAGGBCAAGTGCC (Motif 18)

C T G A C T G A A C T G C T A G A G T C A G T C C G T A C G T A A C T G C G A T A C T G A T G C A G T C
Reverse Opposite:
A C T G A T C G G T A C C G T A A G T C A C G T A C G T A C T G T A C G A G T C A G T C A G C T A G C T
p-value:1e-10
log p-value:-2.523e+01
Information Content per bp:1.846
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.6 +/- 25.7bp
Average Position of motif in Background50.4 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0171.1_Nkx2-1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AAGGBCAAGTGCC---
AANTTCAAGTGGCTTN
 C T G A C T G A A C T G C T A G A G T C A G T C C G T A C G T A A C T G C G A T A C T G A T G C A G T C A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AAGGBCAAGTGCC
CAAGGHCANV----
 A C G T C T G A C T G A A C T G C T A G A G T C A G T C C G T A C G T A A C T G C G A T A C T G A T G C A G T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAGGBCAAGTGCC
AAGGTCAC-----
 C T G A C T G A A C T G C T A G A G T C A G T C C G T A C G T A A C T G C G A T A C T G A T G C A G T C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAGGBCAAGTGCC
CAAAGGTCAAGGG--
 A C G T A C G T C T G A C T G A A C T G C T A G A G T C A G T C C G T A C G T A A C T G C G A T A C T G A T G C A G T C
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AAGGBCAAGTGCC
TCTCAAAGGTCACGAG--
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G A G T C A G T C C G T A C G T A A C T G C G A T A C T G A T G C A G T C
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAGGBCAAGTGCC
TCAAGGTCAT-----
 A C G T A C G T C T G A C T G A A C T G C T A G A G T C A G T C C G T A C G T A A C T G C G A T A C T G A T G C A G T C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AAGGBCAAGTGCC
TCAAGGTCAN-----
 A C G T A C G T C T G A C T G A A C T G C T A G A G T C A G T C C G T A C G T A A C T G C G A T A C T G A T G C A G T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAGGBCAAGTGCC
BTCAAGGTCA------
 A C G T A C G T A C G T C T G A C T G A A C T G C T A G A G T C A G T C C G T A C G T A A C T G C G A T A C T G A T G C A G T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AAGGBCAAGTGCC
TATTCAAGGTCATGCGA-
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G A G T C A G T C C G T A C G T A A C T G C G A T A C T G A T G C A G T C
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAGGBCAAGTGCC---
AATTTCAAGTGGCTTN
 C T G A C T G A A C T G C T A G A G T C A G T C C G T A C G T A A C T G C G A T A C T G A T G C A G T C A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A