Information for 11-AGTATTTTAYTAAACA (Motif 11)

C G T A C T A G A C G T C G T A C G A T C G A T C G A T G A C T C G T A A G C T C G A T T G C A C G T A C G T A A T G C C G T A
Reverse Opposite:
C G A T A T C G G C A T G C A T A C G T C G T A T C G A G C A T C T G A C G T A C G T A C G T A C G A T C G T A A G T C A C G T
p-value:1e-14
log p-value:-3.232e+01
Information Content per bp:1.731
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.3 +/- 30.1bp
Average Position of motif in Background51.1 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGTATTTTAYTAAACA
NNANTTTTATTGGNNN
 C G T A C T A G A C G T C G T A C G A T C G A T C G A T G A C T C G T A A G C T C G A T T G C A C G T A C G T A A T G C C G T A
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0038.1_Hlx/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGTATTTTAYTAAACA
TGTAATTAATTATGG-
 C G T A C T A G A C G T C G T A C G A T C G A T C G A T G A C T C G T A A G C T C G A T T G C A C G T A C G T A A T G C C G T A
C A G T C T A G G A C T G C T A C G T A G A C T G A C T C G T A C T G A G C A T C G A T C T G A C A G T C A T G C A T G A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGTATTTTAYTAAACA
NTNAATTTTATTGNATT
 A C G T C G T A C T A G A C G T C G T A C G A T C G A T C G A T G A C T C G T A A G C T C G A T T G C A C G T A C G T A A T G C C G T A
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGTATTTTAYTAAACA
--AATATTAATAAAGA
 C G T A C T A G A C G T C G T A C G A T C G A T C G A T G A C T C G T A A G C T C G A T T G C A C G T A C G T A A T G C C G T A
A C G T A C G T G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

PH0095.1_Lhx5/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGTATTTTAYTAAACA-
ANNATTTAATTAATTNN
 C G T A C T A G A C G T C G T A C G A T C G A T C G A T G A C T C G T A A G C T C G A T T G C A C G T A C G T A A T G C C G T A A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

PH0101.1_Lmx1b/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGTATTTTAYTAAACA-
AGTTTTTAATTAATTTG
 C G T A C T A G A C G T C G T A C G A T C G A T C G A T G A C T C G T A A G C T C G A T T G C A C G T A C G T A A T G C C G T A A C G T
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

PH0046.1_Hoxa10/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGTATTTTAYTAAACA
TNAATTTTATTACCTN
 C G T A C T A G A C G T C G T A C G A T C G A T C G A T G A C T C G T A A G C T C G A T T G C A C G T A C G T A A T G C C G T A
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

PB0182.1_Srf_2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGTATTTTAYTAAACA
NNNNTTTTTTTTTNAAC-
 A C G T A C G T C G T A C T A G A C G T C G T A C G A T C G A T C G A T G A C T C G T A A G C T C G A T T G C A C G T A C G T A A T G C C G T A
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T

PH0018.1_Dbx1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----AGTATTTTAYTAAACA
TNATTATTAATTAATTA----
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C G T A C G A T C G A T C G A T G A C T C G T A A G C T C G A T T G C A C G T A C G T A A T G C C G T A
G A C T C G T A G C T A A G C T G A C T C G T A C G A T G C A T C G T A C G T A G C A T C G A T C G T A C G T A G A C T C G A T C T G A A C G T A C G T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGTATTTTAYTAAACA
GNATTTTTTTTTTGANC-
 A C G T A C G T C G T A C T A G A C G T C G T A C G A T C G A T C G A T G A C T C G T A A G C T C G A T T G C A C G T A C G T A A T G C C G T A
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C A C G T