Information for 18-TCCAGGCAGAAVA (Motif 24)

A G C T G T A C A G T C C G T A A C T G A C T G A G T C C G T A C T A G C T G A C G T A T A C G C G T A
Reverse Opposite:
G C A T A G T C A C G T A G C T A G T C A C G T A C T G A G T C A G T C A C G T A C T G A C T G C T G A
p-value:1e-8
log p-value:-1.996e+01
Information Content per bp:1.865
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.4 +/- 20.6bp
Average Position of motif in Background45.0 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TCCAGGCAGAAVA
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A G C T G T A C A G T C C G T A A C T G A C T G A G T C C G T A C T A G C T G A C G T A T A C G C G T A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCCAGGCAGAAVA
-CCAGACAG----
 A G C T G T A C A G T C C G T A A C T G A C T G A G T C C G T A C T A G C T G A C G T A T A C G C G T A
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------TCCAGGCAGAAVA
NNNCTTTCCAGGAAA----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T A C A G T C C G T A A C T G A C T G A G T C C G T A C T A G C T G A C G T A T A C G C G T A
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCCAGGCAGAAVA
TTCCNGGAAG----
 A C G T A G C T G T A C A G T C C G T A A C T G A C T G A G T C C G T A C T A G C T G A C G T A T A C G C G T A
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TCCAGGCAGAAVA
NGCTTTCTAGGAAN----
 A C G T A C G T A C G T A C G T A C G T A G C T G T A C A G T C C G T A A C T G A C T G A G T C C G T A C T A G C T G A C G T A T A C G C G T A
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGGCAGAAVA
TGCCCAGNHW-----
 A C G T A C G T A G C T G T A C A G T C C G T A A C T G A C T G A G T C C G T A C T A G C T G A C G T A T A C G C G T A
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCCAGGCAGAAVA
NTTTCCNGGAAA----
 A C G T A C G T A C G T A G C T G T A C A G T C C G T A A C T G A C T G A G T C C G T A C T A G C T G A C G T A T A C G C G T A
T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A A C G T A C G T A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCCAGGCAGAAVA
TTTTCCCGCCAAAA--
 A C G T A C G T A C G T A G C T G T A C A G T C C G T A A C T G A C T G A G T C C G T A C T A G C T G A C G T A T A C G C G T A
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TCCAGGCAGAAVA
NNCTTCCNGGAAGN---
 A C G T A C G T A C G T A C G T A G C T G T A C A G T C C G T A A C T G A C T G A G T C C G T A C T A G C T G A C G T A T A C G C G T A
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCCAGGCAGAAVA
-BCAGACWA----
 A G C T G T A C A G T C C G T A A C T G A C T G A G T C C G T A C T A G C T G A C G T A T A C G C G T A
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T