Information for 10-GTCATAACTT (Motif 18)

C T A G C A G T T A G C T C G A C G A T C T G A C G T A G T A C G A C T A C G T
Reverse Opposite:
G T C A C T G A C A T G G C A T G A C T G C T A A G C T A T C G G T C A G A T C
p-value:1e-10
log p-value:-2.500e+01
Information Content per bp:1.712
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif198.1
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets49.5 +/- 25.2bp
Average Position of motif in Background49.4 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTCATAACTT
GTCATN----
 C T A G C A G T T A G C T C G A C G A T C T G A C G T A G T A C G A C T A C G T
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GTCATAACTT--
---TTGACTTTT
 C T A G C A G T T A G C T C G A C G A T C T G A C G T A G T A C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

PH0073.1_Hoxc9/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GTCATAACTT--
GGAGGTCATTAATTAT
 A C G T A C G T A C G T A C G T C T A G C A G T T A G C T C G A C G A T C T G A C G T A G T A C G A C T A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTCATAACTT---
ATGTCACAACAACAC
 A C G T A C G T C T A G C A G T T A G C T C G A C G A T C T G A C G T A G T A C G A C T A C G T A C G T A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0176.1_Sox5_2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTCATAACTT----
TATCATAATTAAGGA
 A C G T C T A G C A G T T A G C T C G A C G A T C T G A C G T A G T A C G A C T A C G T A C G T A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

HOXC10/MA0905.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTCATAACTT
GTCGTAAAAT
 C T A G C A G T T A G C T C G A C G A T C T G A C G T A G T A C G A C T A C G T
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

PH0065.1_Hoxc10/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCATAACTT--
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T A C G T C T A G C A G T T A G C T C G A C G A T C T G A C G T A G T A C G A C T A C G T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCATAACTT--
AAAGGTAATAAAATTT
 A C G T A C G T A C G T A C G T C T A G C A G T T A G C T C G A C G A T C T G A C G T A G T A C G A C T A C G T A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTCATAACTT
GTCATAAAAN
 C T A G C A G T T A G C T C G A C G A T C T G A C G T A G T A C G A C T A C G T
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

PH0012.1_Cdx1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTCATAACTT--
TAAGGTAATAAAATTA
 A C G T A C G T A C G T A C G T C T A G C A G T T A G C T C G A C G A T C T G A C G T A G T A C G A C T A C G T A C G T A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A