Information for 13-ATTTTACTACATC (Motif 16)

G C T A A C G T A C G T A C G T A G C T C G T A A G T C A G C T C G T A A T G C C G T A A C G T G T A C
Reverse Opposite:
A C T G C G T A C G A T A T C G A C G T C T G A C T A G A C G T C T G A C G T A T C G A C G T A C G A T
p-value:1e-11
log p-value:-2.629e+01
Information Content per bp:1.815
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.9 +/- 28.6bp
Average Position of motif in Background37.1 +/- 47.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0046.1_Hoxa10/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTACTACATC
TNAATTTTATTACCTN
 A C G T A C G T A C G T G C T A A C G T A C G T A C G T A G C T C G T A A G T C A G C T C G T A A T G C C G T A A C G T G T A C
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

PH0075.1_Hoxd10/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----ATTTTACTACATC
NTNAATTTTATTGNATT
 A C G T A C G T A C G T A C G T G C T A A C G T A C G T A C G T A G C T C G T A A G T C A G C T C G T A A T G C C G T A A C G T G T A C
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ATTTTACTACATC-
NAATTTTATTACCTNN
 A C G T A C G T G C T A A C G T A C G T A C G T A G C T C G T A A G T C A G C T C G T A A T G C C G T A A C G T G T A C A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

PH0047.1_Hoxa11/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ATTTTACTACATC-
NNGTTTTACGACTTTA
 A C G T A C G T G C T A A C G T A C G T A C G T A G C T C G T A A G T C A G C T C G T A A T G C C G T A A C G T G T A C A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATTTTACTACATC
NTTTTATGAC---
 G C T A A C G T A C G T A C G T A G C T C G T A A G T C A G C T C G T A A T G C C G T A A C G T G T A C
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATTTTACTACATC
NTTTTATTACN--
 G C T A A C G T A C G T A C G T A G C T C G T A A G T C A G C T C G T A A T G C C G T A A C G T G T A C
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ATTTTACTACATC-
NNNTTTTACGACNTTN
 A C G T A C G T G C T A A C G T A C G T A C G T A G C T C G T A A G T C A G C T C G T A A T G C C G T A A C G T G T A C A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

PH0065.1_Hoxc10/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ATTTTACTACATC-
ANNTTTTACGACNTNN
 A C G T A C G T G C T A A C G T A C G T A C G T A G C T C G T A A G T C A G C T C G T A A T G C C G T A A C G T G T A C A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

HOXD11/MA0908.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATTTTACTACATC
NTTTTACGAC---
 G C T A A C G T A C G T A C G T A G C T C G T A A G T C A G C T C G T A A T G C C G T A A C G T G T A C
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATTTTACTACATC
NTTTTACGAC---
 G C T A A C G T A C G T A C G T A G C T C G T A A G T C A G C T C G T A A T G C C G T A A C G T G T A C
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T A C G T