Information for 4-CCGCGCCGGAGAGGCC (Motif 5)

A G T C A G T C A C T G A G T C A T C G A G T C G T A C A C T G A C T G C G T A T C A G C T G A A C T G A C T G A G T C G T A C
Reverse Opposite:
A C T G A C T G A G T C A G T C A G C T A G T C A C G T A G T C A G T C A C T G A C T G T A G C A C T G A G T C A C T G A C T G
p-value:1e-10
log p-value:-2.506e+01
Information Content per bp:1.931
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.94%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.5 +/- 19.1bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCGCGCCGGAGAGGCC
AGCGCGCC---------
 A C G T A G T C A G T C A C T G A G T C A T C G A G T C G T A C A C T G A C T G C G T A T C A G C T G A A C T G A C T G A G T C G T A C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCGCGCCGGAGAGGCC
ATCCCCGCCCCTAAAA----
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A T C G A G T C G T A C A C T G A C T G C G T A T C A G C T G A A C T G A C T G A G T C G T A C
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.52
Offset:11
Orientation:forward strand
Alignment:CCGCGCCGGAGAGGCC---
-----------AGGCCTNG
 A G T C A G T C A C T G A G T C A T C G A G T C G T A C A C T G A C T G C G T A T C A G C T G A A C T G A C T G A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

PB0202.1_Zfp410_2/Jaspar

Match Rank:4
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CCGCGCCGGAGAGGCC
TCACCCCGCCCCAAATT----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A T C G A G T C G T A C A C T G A C T G C G T A T C A G C T G A A C T G A C T G A G T C G T A C
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CCGCGCCGGAGAGGCC
--GGGCGGGAAGG---
 A G T C A G T C A C T G A G T C A T C G A G T C G T A C A C T G A C T G C G T A T C A G C T G A A C T G A C T G A G T C G T A C
A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.50
Offset:11
Orientation:forward strand
Alignment:CCGCGCCGGAGAGGCC---
-----------AGGCCTAG
 A G T C A G T C A C T G A G T C A T C G A G T C G T A C A C T G A C T G C G T A T C A G C T G A A C T G A C T G A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.50
Offset:10
Orientation:reverse strand
Alignment:CCGCGCCGGAGAGGCC--------
----------CAGGCCNNGGCCNN
 A G T C A G T C A C T G A G T C A T C G A G T C G T A C A C T G A C T G C G T A T C A G C T G A A C T G A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CCGCGCCGGAGAGGCC
---GGCGGGAARN---
 A G T C A G T C A C T G A G T C A T C G A G T C G T A C A C T G A C T G C G T A T C A G C T G A A C T G A C T G A G T C G T A C
A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CCGCGCCGGAGAGGCC
NCCCCCCCGGGGGGN--
 A C G T A G T C A G T C A C T G A G T C A T C G A G T C G T A C A C T G A C T G C G T A T C A G C T G A A C T G A C T G A G T C G T A C
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:CCGCGCCGGAGAGGCC-
-------GGAAANCCCC
 A G T C A G T C A C T G A G T C A T C G A G T C G T A C A C T G A C T G C G T A T C A G C T G A A C T G A C T G A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C