Information for 1-TGGAMTGTACCAT (Motif 1)

A G C T C T A G A C T G T C G A T G A C A G C T C T A G G A C T C G T A A G T C A G T C C G T A G C A T
Reverse Opposite:
C G T A C G A T C T A G A C T G G C A T C T G A G A T C T C G A A C T G A G C T G T A C A G T C C T G A
p-value:1e-28
log p-value:-6.546e+01
Information Content per bp:1.664
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif10.68%
Number of Background Sequences with motif117.1
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets42.4 +/- 22.9bp
Average Position of motif in Background48.7 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGGAMTGTACCAT----
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T A G C T C T A G A C T G T C G A T G A C A G C T C T A G G A C T C G T A A G T C A G T C C G T A G C A T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGAMTGTACCAT
-GGAAATCCCC--
 A G C T C T A G A C T G T C G A T G A C A G C T C T A G G A C T C G T A A G T C A G T C C G T A G C A T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGGAMTGTACCAT
-GGAAATTCCC--
 A G C T C T A G A C T G T C G A T G A C A G C T C T A G G A C T C G T A A G T C A G T C C G T A G C A T
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGGAMTGTACCAT
GGGAAATCCCCN-
 A G C T C T A G A C T G T C G A T G A C A G C T C T A G G A C T C G T A A G T C A G T C C G T A G C A T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T

HES7/MA0822.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGAMTGTACCAT
TGGCACGTGCCA-
 A G C T C T A G A C T G T C G A T G A C A G C T C T A G G A C T C G T A A G T C A G T C C G T A G C A T
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGGAMTGTACCAT
NNATTGGACTTTNGNN-
 A C G T A C G T A C G T A C G T A G C T C T A G A C T G T C G A T G A C A G C T C T A G G A C T C G T A A G T C A G T C C G T A G C A T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGAMTGTACCAT
TGGAATGT-----
 A G C T C T A G A C T G T C G A T G A C A G C T C T A G G A C T C G T A A G T C A G T C C G T A G C A T
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGGAMTGTACCAT
-GGAAANCCCC--
 A G C T C T A G A C T G T C G A T G A C A G C T C T A G G A C T C G T A A G T C A G T C C G T A G C A T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGGAMTGTACCAT
TTCTAGAABNTTCTA-
 A C G T A C G T A C G T A G C T C T A G A C T G T C G A T G A C A G C T C T A G G A C T C G T A A G T C A G T C C G T A G C A T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGGAMTGTACCAT-
----ATTTTCCATT
 A G C T C T A G A C T G T C G A T G A C A G C T C T A G G A C T C G T A A G T C A G T C C G T A G C A T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T