Information for 9-TGGGTCTTTC (Motif 9)

A C G T A C T G T A C G A C T G C G A T G A T C A C G T A G C T G A C T A G T C
Reverse Opposite:
T C A G C T G A T C G A T G C A C T A G G C T A T G A C A T G C T G A C T G C A
p-value:1e-11
log p-value:-2.647e+01
Information Content per bp:1.648
Number of Target Sequences with motif86.0
Percentage of Target Sequences with motif9.12%
Number of Background Sequences with motif1797.7
Percentage of Background Sequences with motif4.00%
Average Position of motif in Targets50.4 +/- 27.4bp
Average Position of motif in Background51.2 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TGGGTCTTTC-
-GGGGATTTCC
 A C G T A C T G T A C G A C T G C G A T G A T C A C G T A G C T G A C T A G T C A C G T
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TGGGTCTTTC-
-GGGGATTTCC
 A C G T A C T G T A C G A C T G C G A T G A T C A C G T A G C T G A C T A G T C A C G T
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGGGTCTTTC-
-GGGAATTTCC
 A C G T A C T G T A C G A C T G C G A T G A T C A C G T A G C T G A C T A G T C A C G T
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGGGTCTTTC
NRRGGGTCTT--
 A C G T A C G T A C G T A C T G T A C G A C T G C G A T G A T C A C G T A G C T G A C T A G T C
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGGGTCTTTC-
-GGGAATTTCC
 A C G T A C T G T A C G A C T G C G A T G A T C A C G T A G C T G A C T A G T C A C G T
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGGGTCTTTC--
NGGGGATTTCCC
 A C G T A C T G T A C G A C T G C G A T G A T C A C G T A G C T G A C T A G T C A C G T A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGGGTCTTTC---
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C T G T A C G A C T G C G A T G A T C A C G T A G C T G A C T A G T C A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGGTCTTTC
TGGGTGTGGC
 A C G T A C T G T A C G A C T G C G A T G A T C A C G T A G C T G A C T A G T C
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGGGTCTTTC------
----ACTTTCACTTTC
 A C G T A C T G T A C G A C T G C G A T G A T C A C G T A G C T G A C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGGGTCTTTC-
GGGGGTGTGTCC
 A C G T A C G T A C T G T A C G A C T G C G A T G A T C A C G T A G C T G A C T A G T C A C G T
T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C