Information for 3-AAGATGGCGG (Motif 8)

C T G A T G C A T A C G G C T A C A G T A T C G C A T G A G T C C T A G T C A G
Reverse Opposite:
A G T C G A T C T C A G G T A C A T G C G T C A C G A T A T G C A C G T A G C T
p-value:1e-10
log p-value:-2.481e+01
Information Content per bp:1.560
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.32%
Number of Background Sequences with motif574.7
Percentage of Background Sequences with motif1.22%
Average Position of motif in Targets53.5 +/- 27.7bp
Average Position of motif in Background51.0 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-AAGATGGCGG-
CAAGATGGCGGC
 A C G T C T G A T G C A T A C G G C T A C A G T A T C G C A T G A G T C C T A G T C A G A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-AAGATGGCGG-
CAAGATGGCGGC
 A C G T C T G A T G C A T A C G G C T A C A G T A T C G C A T G A G T C C T A G T C A G A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AAGATGGCGG--
-TAATGGCGGNC
 C T G A T G C A T A C G G C T A C A G T A T C G C A T G A G T C C T A G T C A G A C G T A C G T
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AAGATGGCGG------
NAGANTGGCGGGGNGNA
 A C G T C T G A T G C A T A C G G C T A C A G T A T C G C A T G A G T C C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGATGGCGG---
-RGKGGGCGGAGC
 C T G A T G C A T A C G G C T A C A G T A T C G C A T G A G T C C T A G T C A G A C G T A C G T A C G T
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAGATGGCGG----
--BTKGGCGGGAAA
 C T G A T G C A T A C G G C T A C A G T A T C G C A T G A G T C C T A G T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAGATGGCGG
-TNNGGGCAG
 C T G A T G C A T A C G G C T A C A G T A T C G C A T G A G T C C T A G T C A G
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAGATGGCGG---
GGGNGGGGGCGGGGC
 A C G T A C G T C T G A T G C A T A C G G C T A C A G T A T C G C A T G A G T C C T A G T C A G A C G T A C G T A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AAGATGGCGG----
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T C T G A T G C A T A C G G C T A C A G T A T C G C A T G A G T C C T A G T C A G A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AAGATGGCGG
---TTGGCA-
 C T G A T G C A T A C G G C T A C A G T A T C G C A T G A G T C C T A G T C A G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T