Information for 9-ACAGCCWGGGCCA (Motif 8)

T G C A A T G C C G T A T A C G G A T C A G T C C G A T C T A G C T A G A C T G A G T C A T G C G T C A
Reverse Opposite:
A C G T A T C G T C A G G T A C A G T C G A T C G C T A A C T G C A T G A T G C C G A T A T C G A C G T
p-value:1e-12
log p-value:-2.966e+01
Information Content per bp:1.777
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif56.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets57.8 +/- 26.6bp
Average Position of motif in Background48.5 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACAGCCWGGGCCA
---NTCAAGGTCA
 T G C A A T G C C G T A T A C G G A T C A G T C C G A T C T A G C T A G A C T G A G T C A T G C G T C A
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:forward strand
Alignment:ACAGCCWGGGCCA--
-----CAAGGHCANV
 T G C A A T G C C G T A T A C G G A T C A G T C C G A T C T A G C T A G A C T G A G T C A T G C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACAGCCWGGGCCA
---BTCAAGGTCA
 T G C A A T G C C G T A T A C G G A T C A G T C C G A T C T A G C T A G A C T G A G T C A T G C G T C A
A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACAGCCWGGGCCA
BCAGACWA-----
 T G C A A T G C C G T A T A C G G A T C A G T C C G A T C T A G C T A G A C T G A G T C A T G C G T C A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ACAGCCWGGGCCA
AGCAACAGCCGCACC--
 A C G T A C G T A C G T A C G T T G C A A T G C C G T A T A C G G A T C A G T C C G A T C T A G C T A G A C T G A G T C A T G C G T C A
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:ACAGCCWGGGCCA
-----CTAGGCCT
 T G C A A T G C C G T A T A C G G A T C A G T C C G A T C T A G C T A G A C T G A G T C A T G C G T C A
A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCCWGGGCCA
CACAGN--------
 A C G T T G C A A T G C C G T A T A C G G A T C A G T C C G A T C T A G C T A G A C T G A G T C A T G C G T C A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACAGCCWGGGCCA-
GGGGCCGAGGCCTG
 T G C A A T G C C G T A T A C G G A T C A G T C C G A T C T A G C T A G A C T G A G T C A T G C G T C A A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACAGCCWGGGCCA
GGTCANYTGAGGWCA
 A C G T A C G T T G C A A T G C C G T A T A C G G A T C A G T C C G A T C T A G C T A G A C T G A G T C A T G C G T C A
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACAGCCWGGGCCA
--WDNCTGGGCA-
 T G C A A T G C C G T A T A C G G A T C A G T C C G A T C T A G C T A G A C T G A G T C A T G C G T C A
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T