Information for 10-ATCAGCGGGA (Motif 12)

T C G A A C G T A G T C C G T A A C T G G T A C C T A G A C T G A C T G G T C A
Reverse Opposite:
A C G T A G T C G T A C G A T C A C T G A G T C C G A T A C T G G T C A A G C T
p-value:1e-7
log p-value:-1.788e+01
Information Content per bp:1.852
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif116.4
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets50.9 +/- 24.8bp
Average Position of motif in Background46.3 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-ATCAGCGGGA
DCTCAGCAGG-
 A C G T T C G A A C G T A G T C C G T A A C T G G T A C C T A G A C T G A C T G G T C A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.73
Offset:3
Orientation:forward strand
Alignment:ATCAGCGGGA---
---GGCGGGAARN
 T C G A A C G T A G T C C G T A A C T G G T A C C T A G A C T G A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATCAGCGGGA----
DCHCAGCAGGRGGCC
 A C G T T C G A A C G T A G T C C G T A A C T G G T A C C T A G A C T G A C T G G T C A A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

E2F4/MA0470.1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ATCAGCGGGA---
--GGGCGGGAAGG
 T C G A A C G T A G T C C G T A A C T G G T A C C T A G A C T G A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATCAGCGGGA--
GAGCACAGCAGGACA
 A C G T A C G T A C G T T C G A A C G T A G T C C G T A A C T G G T A C C T A G A C T G A C T G G T C A A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATCAGCGGGA--
CCACACAGCAGGAGA
 A C G T A C G T A C G T T C G A A C G T A G T C C G T A A C T G G T A C C T A G A C T G A C T G G T C A A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.66
Offset:3
Orientation:forward strand
Alignment:ATCAGCGGGA---
---GGCGGGAAAH
 T C G A A C G T A G T C C G T A A C T G G T A C C T A G A C T G A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATCAGCGGGA--
CCACACAGCAGGAGA
 A C G T A C G T A C G T T C G A A C G T A G T C C G T A A C T G G T A C C T A G A C T G A C T G G T C A A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATCAGCGGGA--
CACAGCAGGGGG
 T C G A A C G T A G T C C G T A A C T G G T A C C T A G A C T G A C T G G T C A A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATCAGCGGGA
NAACAGCTGG-
 A C G T T C G A A C G T A G T C C G T A A C T G G T A C C T A G A C T G A C T G G T C A
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T