p-value: | 1e-12 |
log p-value: | -2.843e+01 |
Information Content per bp: | 1.654 |
Number of Target Sequences with motif | 61.0 |
Percentage of Target Sequences with motif | 7.34% |
Number of Background Sequences with motif | 664.2 |
Percentage of Background Sequences with motif | 2.54% |
Average Position of motif in Targets | 49.4 +/- 27.6bp |
Average Position of motif in Background | 49.4 +/- 32.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.1 |
Multiplicity (# of sites on avg that occur together) | 1.07 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0070.1_Sox30_1/Jaspar
Match Rank: | 1 |
Score: | 0.88 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTCCATTGTT---- ANNTCCATTGTTCNNN |
|
|
|
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
Match Rank: | 2 |
Score: | 0.88 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTCCATTGTT-- --CCATTGTTYB |
|
|
|
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 3 |
Score: | 0.87 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TTCCATTGTT- -NCCATTGTTC |
|
|
|
SOX9/MA0077.1/Jaspar
Match Rank: | 4 |
Score: | 0.86 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTCCATTGTT- --CCATTGTTC |
|
|
|
Sox2/MA0143.3/Jaspar
Match Rank: | 5 |
Score: | 0.85 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTCCATTGTT --CCTTTGTT |
|
|
|
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
Match Rank: | 6 |
Score: | 0.84 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTCCATTGTT- -NCCATTGTTY |
|
|
|
PB0061.1_Sox11_1/Jaspar
Match Rank: | 7 |
Score: | 0.83 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTCCATTGTT----- NNNTCCTTTGTTCTNNN |
|
|
|
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 8 |
Score: | 0.83 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTCCATTGTT --CCWTTGTY |
|
|
|
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
Match Rank: | 9 |
Score: | 0.82 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTCCATTGTT-- --CCATTGTTNY |
|
|
|
Sox6/MA0515.1/Jaspar
Match Rank: | 10 |
Score: | 0.82 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTCCATTGTT-- --CCATTGTTTT |
|
|
|