Information for 5-CCCTGAAAACAAAGCC (Motif 4)

A T G C A G T C G T A C A G C T A T C G T C G A C G T A C G T A C G T A A G T C G T C A C G T A C G T A C T A G A T G C A G T C
Reverse Opposite:
C T A G A T C G A G T C C G A T A C G T A C G T C T A G C G A T A C G T C G A T A G C T A T G C C T G A A C T G T C A G A T C G
p-value:1e-14
log p-value:-3.274e+01
Information Content per bp:1.750
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 16.1bp
Average Position of motif in Background61.8 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CCCTGAAAACAAAGCC
-----AAAACAAAGG-
 A T G C A G T C G T A C A G C T A T C G T C G A C G T A C G T A C G T A A G T C G T C A C G T A C G T A C T A G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CCCTGAAAACAAAGCC
----GAAASYGAAASY
 A T G C A G T C G T A C A G C T A T C G T C G A C G T A C G T A C G T A A G T C G T C A C G T A C G T A C T A G A T G C A G T C
A C G T A C G T A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCCTGAAAACAAAGCC---
--AGAAGAACAAAGGACTA
 A T G C A G T C G T A C A G C T A T C G T C G A C G T A C G T A C G T A A G T C G T C A C G T A C G T A C T A G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCCTGAAAACAAAGCC
----GAAAMTGAAACT
 A T G C A G T C G T A C A G C T A T C G T C G A C G T A C G T A C G T A A G T C G T C A C G T A C G T A C T A G A T G C A G T C
A C G T A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCCTGAAAACAAAGCC
ATATCAAAACAAAACA
 A T G C A G T C G T A C A G C T A T C G T C G A C G T A C G T A C G T A A G T C G T C A C G T A C G T A C T A G A T G C A G T C
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCCTGAAAACAAAGCC---
--ATAAGAACAAAGGACTA
 A T G C A G T C G T A C A G C T A T C G T C G A C G T A C G T A C G T A A G T C G T C A C G T A C G T A C T A G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCCTGAAAACAAAGCC
-----ACATCAAAGG-
 A T G C A G T C G T A C A G C T A T C G T C G A C G T A C G T A C G T A A G T C G T C A C G T A C G T A C T A G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCCTGAAAACAAAGCC--
-GTTCAAAAAAAAAATTC
 A T G C A G T C G T A C A G C T A T C G T C G A C G T A C G T A C G T A A G T C G T C A C G T A C G T A C T A G A T G C A G T C A C G T A C G T
A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.58
Offset:7
Orientation:forward strand
Alignment:CCCTGAAAACAAAGCC
-------ATTAAA---
 A T G C A G T C G T A C A G C T A T C G T C G A C G T A C G T A C G T A A G T C G T C A C G T A C G T A C T A G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCCTGAAAACAAAGCC
CAAAAGTAAACAAAG--
 A C G T A T G C A G T C G T A C A G C T A T C G T C G A C G T A C G T A C G T A A G T C G T C A C G T A C G T A C T A G A T G C A G T C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T