Information for 7-CAGCMMCAGACTG (Motif 7)

A G T C C G T A A C T G G T A C T G C A T G A C A G T C G T C A A C T G T G C A A G T C A C G T C T A G
Reverse Opposite:
A G T C C G T A A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C T G A G T C A C G T C T A G
p-value:1e-11
log p-value:-2.708e+01
Information Content per bp:1.818
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif56.9
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets49.3 +/- 28.0bp
Average Position of motif in Background52.9 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CAGCMMCAGACTG
-----CCAGACAG
 A G T C C G T A A C T G G T A C T G C A T G A C A G T C G T C A A C T G T G C A A G T C A C G T C T A G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CAGCMMCAGACTG
-----BCAGACWA
 A G T C C G T A A C T G G T A C T G C A T G A C A G T C G T C A A C T G T G C A A G T C A C G T C T A G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CAGCMMCAGACTG--
-----CCAGACRSVB
 A G T C C G T A A C T G G T A C T G C A T G A C A G T C G T C A A C T G T G C A A G T C A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGCMMCAGACTG
-AGCCTCAGGCA-
 A G T C C G T A A C T G G T A C T G C A T G A C A G T C G T C A A C T G T G C A A G T C A C G T C T A G
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAGCMMCAGACTG----
CAAATCCAGACATCACA
 A G T C C G T A A C T G G T A C T G C A T G A C A G T C G T C A A C T G T G C A A G T C A C G T C T A G A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGCMMCAGACTG
-AGCCTCAGGCA-
 A G T C C G T A A C T G G T A C T G C A T G A C A G T C G T C A A C T G T G C A A G T C A C G T C T A G
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGCMMCAGACTG
-CGCCTCAGGCA-
 A G T C C G T A A C T G G T A C T G C A T G A C A G T C G T C A A C T G T G C A A G T C A C G T C T A G
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAGCMMCAGACTG
CAGCC--------
 A G T C C G T A A C T G G T A C T G C A T G A C A G T C G T C A A C T G T G C A A G T C A C G T C T A G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGCMMCAGACTG---
-AGCAACAGCCGCACC
 A G T C C G T A A C T G G T A C T G C A T G A C A G T C G T C A A C T G T G C A A G T C A C G T C T A G A C G T A C G T A C G T
A C G T T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CAGCMMCAGACTG
AAACCACAGAN--
 A G T C C G T A A C T G G T A C T G C A T G A C A G T C G T C A A C T G T G C A A G T C A C G T C T A G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T