p-value: | 1e-5 |
log p-value: | -1.244e+01 |
Information Content per bp: | 1.962 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.57% |
Number of Background Sequences with motif | 5.1 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 55.2 +/- 22.9bp |
Average Position of motif in Background | 38.4 +/- 23.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 1 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCGCCTTGCC-- -NNACTTGCCTT |
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YY2/MA0748.1/Jaspar
Match Rank: | 2 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCGCCTTGCC GTCCGCCATTA- |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CCGCCTTGCC-- ----CTTGGCAA |
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PB0164.1_Smad3_2/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------CCGCCTTGCC- TACGCCCCGCCACTCTG |
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PB0180.1_Sp4_2/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------CCGCCTTGCC NNGGCCACGCCTTTN- |
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SP2/MA0516.1/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCGCCTTGCC-- GCCCCGCCCCCTCCC |
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THAP1/MA0597.1/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CCGCCTTGCC---- -----CTGCCCGCA |
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POL006.1_BREu/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCGCCTTGCC AGCGCGCC----- |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCGCCTTGCC BNTGDCCTTG-- |
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PB0124.1_Gabpa_2/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCGCCTTGCC------ CCGTCTTCCCCCTCAC |
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