Information for 12-KCCCRGCRKGCYCCKC (Motif 25)

A C G T A G T C A G T C A G T C C T G A A T C G G T A C C T G A C A G T A C T G A G T C A G T C A G T C A G T C A C G T A G T C
Reverse Opposite:
A C T G G T C A A C T G A C T G C T A G A C T G A G T C G T C A A G C T A C T G A T G C A G C T A C T G A C T G C T A G G T C A
p-value:1e-8
log p-value:-2.034e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 15.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---KCCCRGCRKGCYCCKC
ATTTCCCAGVAKSCY----
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C C T G A A T C G G T A C C T G A C A G T A C T G A G T C A G T C A G T C A G T C A C G T A G T C
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:KCCCRGCRKGCYCCKC
DCTCAGCAGG------
 A C G T A G T C A G T C A G T C C T G A A T C G G T A C C T G A C A G T A C T G A G T C A G T C A G T C A G T C A C G T A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--KCCCRGCRKGCYCCKC
GAGCACAGCAGGACA---
 A C G T A C G T A C G T A G T C A G T C A G T C C T G A A T C G G T A C C T G A C A G T A C T G A G T C A G T C A G T C A G T C A C G T A G T C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--KCCCRGCRKGCYCCKC
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A G T C A G T C A G T C C T G A A T C G G T A C C T G A C A G T A C T G A G T C A G T C A G T C A G T C A C G T A G T C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--KCCCRGCRKGCYCCKC
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A G T C A G T C A G T C C T G A A T C G G T A C C T G A C A G T A C T G A G T C A G T C A G T C A G T C A C G T A G T C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:KCCCRGCRKGCYCCKC
DCHCAGCAGGRGGCC-
 A C G T A G T C A G T C A G T C C T G A A T C G G T A C C T G A C A G T A C T G A G T C A G T C A G T C A G T C A C G T A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:KCCCRGCRKGCYCCKC
CCCCCTTGGGCCCC--
 A C G T A G T C A G T C A G T C C T G A A T C G G T A C C T G A C A G T A C T G A G T C A G T C A G T C A G T C A C G T A G T C
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.54
Offset:9
Orientation:forward strand
Alignment:KCCCRGCRKGCYCCKC
---------GCTCCG-
 A C G T A G T C A G T C A G T C C T G A A T C G G T A C C T G A C A G T A C T G A G T C A G T C A G T C A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.54
Offset:8
Orientation:forward strand
Alignment:KCCCRGCRKGCYCCKC----
--------GGCCCCGCCCCC
 A C G T A G T C A G T C A G T C C T G A A T C G G T A C C T G A C A G T A C T G A G T C A G T C A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-KCCCRGCRKGCYCCKC
TGCCCAGNHW-------
 A C G T A C G T A G T C A G T C A G T C C T G A A T C G G T A C C T G A C A G T A C T G A G T C A G T C A G T C A G T C A C G T A G T C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T