Information for 7-CTTCTTAGAAACA (Motif 5)

A G T C A C G T A C G T T A G C A C G T A C G T C G T A A C T G C G T A G T C A C G T A A G T C C G T A
Reverse Opposite:
A C G T C T A G A C G T A C G T G C A T G T A C A C G T C G T A C G T A A T C G C G T A G T C A A C T G
p-value:1e-11
log p-value:-2.686e+01
Information Content per bp:1.860
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.0 +/- 20.8bp
Average Position of motif in Background81.3 +/- 7.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CTTCTTAGAAACA-
CCGTATTATAAACAA
 A C G T A G T C A C G T A C G T T A G C A C G T A C G T C G T A A C T G C G T A G T C A C G T A A G T C C G T A A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTTCTTAGAAACA
TTTCTNAGAAAN-
 A G T C A C G T A C G T T A G C A C G T A C G T C G T A A C T G C G T A G T C A C G T A A G T C C G T A
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTTCTTAGAAACA
-TTCTTGGAAAN-
 A G T C A C G T A C G T T A G C A C G T A C G T C G T A A C T G C G T A G T C A C G T A A G T C C G T A
A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTTCTTAGAAACA
-TTCTNMGGAA--
 A G T C A C G T A C G T T A G C A C G T A C G T C G T A A C T G C G T A G T C A C G T A A G T C C G T A
A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTTCTTAGAAACA-
--SCCTAGCAACAG
 A G T C A C G T A C G T T A G C A C G T A C G T C G T A A C T G C G T A G T C A C G T A A G T C C G T A A C G T
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTTCTTAGAAACA-
--WWATRTAAACAN
 A G T C A C G T A C G T T A G C A C G T A C G T C G T A A C T G C G T A G T C A C G T A A G T C C G T A A C G T
A C G T A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

PB0129.1_Glis2_2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTCTTAGAAACA--
-TCTTTANTAATANN
 A G T C A C G T A C G T T A G C A C G T A C G T C G T A A C T G C G T A G T C A C G T A A G T C C G T A A C G T A C G T
A C G T A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

Stat4/MA0518.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTTCTTAGAAACA
NNNTTTCCTGGAAA--
 A C G T A C G T A C G T A G T C A C G T A C G T T A G C A C G T A C G T C G T A A C T G C G T A G T C A C G T A A G T C C G T A
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTCTTAGAAACA
ANTTCTNNAGAA--
 A C G T A G T C A C G T A C G T T A G C A C G T A C G T C G T A A C T G C G T A G T C A C G T A A G T C C G T A
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTTCTTAGAAACA-
ANTTCTCAGGAANNN
 A C G T A G T C A C G T A C G T T A G C A C G T A C G T C G T A A C T G C G T A G T C A C G T A A G T C C G T A A C G T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G