Information for 8-CTCTACAATA (Motif 8)

A G T C A C G T A G T C A G C T C G T A A G T C C G T A C G T A A G C T C T G A
Reverse Opposite:
A G C T C T G A A C G T A C G T A C T G A C G T C T G A A C T G C G T A A C T G
p-value:1e-8
log p-value:-1.931e+01
Information Content per bp:1.934
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets42.7 +/- 23.6bp
Average Position of motif in Background53.3 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CTCTACAATA--
---GACAATGNN
 A G T C A C G T A G T C A G C T C G T A A G T C C G T A C G T A A G C T C T G A A C G T A C G T
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0183.1_Sry_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTCTACAATA----
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A G T C A C G T A G T C A G C T C G T A A G T C C G T A C G T A A G C T C T G A A C G T A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTCTACAATA------
NNTNNACAATGGGANNN
 A C G T A G T C A C G T A G T C A G C T C G T A A G T C C G T A C G T A A G C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTCTACAATA
---AACAAT-
 A G T C A C G T A G T C A G C T C G T A A G T C C G T A C G T A A G C T C T G A
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTCTACAATA----
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A G T C A C G T A G T C A G C T C G T A A G T C C G T A C G T A A G C T C T G A A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTCTACAATA
--NAACAAT-
 A G T C A C G T A G T C A G C T C G T A A G T C C G T A C G T A A G C T C T G A
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTCTACAATA
GTAAACAAT-
 A G T C A C G T A G T C A G C T C G T A A G T C C G T A C G T A A G C T C T G A
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTCTACAATA-
-RNAACAATGG
 A G T C A C G T A G T C A G C T C G T A A G T C C G T A C G T A A G C T C T G A A C G T
A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTCTACAATA
----ACAAAG
 A G T C A C G T A G T C A G C T C G T A A G T C C G T A C G T A A G C T C T G A
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTCTACAATA---
NNTNANAACAATTNNA
 A C G T A C G T A C G T A G T C A C G T A G T C A G C T C G T A A G T C C G T A C G T A A G C T C T G A A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A