Information for 3-GACCACTAGGGGGCAM (Motif 2)

A T C G C T G A A T G C A G T C G T C A A T G C A G C T C G T A A C T G C T A G C A T G A T C G A C T G A G T C C T G A T G C A
Reverse Opposite:
A C G T A G C T A C T G G T A C A T G C G T A C A G T C A G T C A C G T C T G A A T C G A C G T A C T G A T C G G A C T A T G C
p-value:1e-25
log p-value:-5.774e+01
Information Content per bp:1.752
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif26.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets47.6 +/- 26.0bp
Average Position of motif in Background43.9 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-GACCACTAGGGGGCAM--
TGGCCACCAGGGGGCGCTA
 A C G T A T C G C T G A A T G C A G T C G T C A A T G C A G C T C G T A A C T G C T A G C A T G A T C G A C T G A G T C C T G A T G C A A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-GACCACTAGGGGGCAM---
TGGCCACCAGGTGGCACTNT
 A C G T A T C G C T G A A T G C A G T C G T C A A T G C A G C T C G T A A C T G C T A G C A T G A T C G A C T G A G T C C T G A T G C A A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:GACCACTAGGGGGCAM-----
-GCCASCAGGGGGCGCYVNNG
 A T C G C T G A A T G C A G T C G T C A A T G C A G C T C G T A A C T G C T A G C A T G A T C G A C T G A G T C C T G A T G C A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GACCACTAGGGGGCAM----
---GGCGAGGGGTCAAGGGC
 A T C G C T G A A T G C A G T C G T C A A T G C A G C T C G T A A C T G C T A G C A T G A T C G A C T G A G T C C T G A T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GACCACTAGGGGGCAM
CACCCCCGGGGGGG--
 A T C G C T G A A T G C A G T C G T C A A T G C A G C T C G T A A C T G C T A G C A T G A T C G A C T G A G T C C T G A T G C A
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GACCACTAGGGGGCAM----
---NNNAAGGGGGCGGGNNN
 A T C G C T G A A T G C A G T C G T C A A T G C A G C T C G T A A C T G C T A G C A T G A T C G A C T G A G T C C T G A T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GACCACTAGGGGGCAM
CATAAGACCACCATTAC----
 A C G T A C G T A C G T A C G T A C G T A T C G C T G A A T G C A G T C G T C A A T G C A G C T C G T A A C T G C T A G C A T G A T C G A C T G A G T C C T G A T G C A
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GACCACTAGGGGGCAM----
---CTCCAGGGGTCAATTGA
 A T C G C T G A A T G C A G T C G T C A A T G C A G C T C G T A A C T G C T A G C A T G A T C G A C T G A G T C C T G A T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GACCACTAGGGGGCAM
DCHCAGCAGGRGGCC-
 A T C G C T G A A T G C A G T C G T C A A T G C A G C T C G T A A C T G C T A G C A T G A T C G A C T G A G T C C T G A T G C A
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

Znf423/MA0116.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GACCACTAGGGGGCAM
GGCACCCAGGGGTGC--
 A C G T A T C G C T G A A T G C A G T C G T C A A T G C A G C T C G T A A C T G C T A G C A T G A T C G A C T G A G T C C T G A T G C A
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C A C G T A C G T