Information for 6-CCCCTGGTGGAATTCC (Motif 18)

A G T C A G T C A G T C A G T C A C G T C A T G A T C G C G A T A C T G A C T G T C G A G C T A G A C T A C G T A G T C G A T C
Reverse Opposite:
C T A G C T A G T G C A C T G A C G A T A G C T A G T C A G T C G C T A A T G C G A T C C G T A C T A G C T A G C T A G C T A G
p-value:1e-5
log p-value:-1.380e+01
Information Content per bp:1.775
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.7 +/- 22.3bp
Average Position of motif in Background62.5 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.65
Offset:-9
Orientation:forward strand
Alignment:---------CCCCTGGTGGAATTCC
CNNBRGCGCCCCCTGSTGGC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T C A T G A T C G C G A T A C T G A C T G T C G A G C T A G A C T A C G T A G T C G A T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------CCCCTGGTGGAATTCC
TAGCGCCCCCTGGTGGCCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T C A T G A T C G C G A T A C T G A C T G T C G A G C T A G A C T A C G T A G T C G A T C
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------CCCCTGGTGGAATTCC
ANAGTGCCACCTGGTGGCCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T C A T G A T C G C G A T A C T G A C T G T C G A G C T A G A C T A C G T A G T C G A T C
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:CCCCTGGTGGAATTCC
------GTGGAT----
 A G T C A G T C A G T C A G T C A C G T C A T G A T C G C G A T A C T G A C T G T C G A G C T A G A C T A C G T A G T C G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CCCCTGGTGGAATTCC
------GGGGATTTCC
 A G T C A G T C A G T C A G T C A C G T C A T G A T C G C G A T A C T G A C T G T C G A G C T A G A C T A C G T A G T C G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CCCCTGGTGGAATTCC-
-----NGGGGATTTCCC
 A G T C A G T C A G T C A G T C A C G T C A T G A T C G C G A T A C T G A C T G T C G A G C T A G A C T A C G T A G T C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCCCTGGTGGAATTCC
---NNTGTGGATTSS-
 A G T C A G T C A G T C A G T C A C G T C A T G A T C G C G A T A C T G A C T G T C G A G C T A G A C T A C G T A G T C G A T C
A C G T A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CCCCTGGTGGAATTCC-
-----GGGGGAATCCCC
 A G T C A G T C A G T C A G T C A C G T C A T G A T C G C G A T A C T G A C T G T C G A G C T A G A C T A C G T A G T C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGGTGGAATTCC
CACCCCCGGGGGGG-----
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T C A T G A T C G C G A T A C T G A C T G T C G A G C T A G A C T A C G T A G T C G A T C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CCCCTGGTGGAATTCC
------GGGGATTTCC
 A G T C A G T C A G T C A G T C A C G T C A T G A T C G C G A T A C T G A C T G T C G A G C T A G A C T A C G T A G T C G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C