Information for 6-TGTTATGAATGTGGAA (Motif 6)

A C G T A C T G A C G T C G A T C G T A G A C T A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G C T G A C G T A
Reverse Opposite:
A C G T A G C T A G T C A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C C G T A
p-value:1e-13
log p-value:-3.179e+01
Information Content per bp:1.946
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.4 +/- 12.1bp
Average Position of motif in Background47.9 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGTTATGAATGTGGAA
NNTNTCATGAATGT----
 A C G T A C G T A C G T A C T G A C G T C G A T C G T A G A C T A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G C T G A C G T A
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGTTATGAATGTGGAA
NTTNTATGAATGTGNNC
 A C G T A C G T A C T G A C G T C G A T C G T A G A C T A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G C T G A C G T A
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

TEAD1/MA0090.2/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGTTATGAATGTGGAA
---NTGGAATGTG---
 A C G T A C T G A C G T C G A T C G T A G A C T A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G C T G A C G T A
A C G T A C G T A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGTTATGAATGTGGAA
---NTGGAATGTN---
 A C G T A C T G A C G T C G A T C G T A G A C T A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G C T G A C G T A
A C G T A C G T A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGTTATGAATGTGGAA
AGTTATTAATGAGGTC
 A C G T A C T G A C G T C G A T C G T A G A C T A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G C T G A C G T A
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

PB0120.1_Foxj1_2/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TGTTATGAATGTGGAA
GTNTTGTTGTGANNT-----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G A T C G T A G A C T A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G C T G A C G T A
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T A C G T A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TGTTATGAATGTGGAA
-CTCATGAATATTCAT
 A C G T A C T G A C G T C G A T C G T A G A C T A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G C T G A C G T A
A C G T T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:TGTTATGAATGTGGAA--
------GAAAGTGAAAGT
 A C G T A C T G A C G T C G A T C G T A G A C T A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

TEAD3/MA0808.1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TGTTATGAATGTGGAA
----TGGAATGT----
 A C G T A C T G A C G T C G A T C G T A G A C T A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G C T G A C G T A
A C G T A C G T A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TGTTATGAATGTGGAA
----ATGAATATTC--
 A C G T A C T G A C G T C G A T C G T A G A C T A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G C T G A C G T A
A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T